Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AIR    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.36 N Y
2 N1 C5 N C sing 1.37 N Y
3 N1 C1' N C sing 1.46 N N
4 C2 N3 C N doub 1.3 N Y
5 C2 HC2 C H sing 1.08 N N
6 N3 C4 N C sing 1.34 N Y
7 C4 C5 C C doub 1.35 N Y
8 C4 HC4 C H sing 1.08 N N
9 C5 N6 C N sing 1.4 N N
10 N6 HN61 N H sing 0.97 N N
11 N6 HN62 N H sing 0.97 N N
12 C1' C2' C C sing 1.54 N N
13 C1' O4' C O sing 1.44 N N
14 C1' HC1' C H sing 1.09 N N
15 C2' C3' C C sing 1.55 N N
16 C2' O2' C O sing 1.43 N N
17 C2' HC2' C H sing 1.09 N N
18 C3' C4' C C sing 1.54 N N
19 C3' O3' C O sing 1.43 N N
20 C3' HC3' C H sing 1.09 N N
21 C4' O4' C O sing 1.44 N N
22 C4' C5' C C sing 1.53 N N
23 C4' HC4' C H sing 1.09 N N
24 O2' HO'2 O H sing 0.97 N N
25 O3' HO'3 O H sing 0.97 N N
26 C5' O5' C O sing 1.43 N N
27 C5' HC51 C H sing 1.09 N N
28 C5' HC52 C H sing 1.09 N N
29 O5' P O P sing 1.61 N N
30 P O6 P O sing 1.61 N N
31 P O7 P O sing 1.61 N N
32 P O8 P O doub 1.48 N N
33 O6 HO6 O H sing 0.97 N N
34 O7 HO7 O H sing 0.97 N N