Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : A5B    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 N2 C N doub 1.32 N Y
2 C11 C10 C C sing 1.39 N Y
3 N2 C12 N C sing 1.33 N Y
4 C9 C10 C C sing 1.5 N N
5 C9 N1 C N sing 1.46 N N
6 C10 C13 C C doub 1.39 N Y
7 C12 N4 C N sing 1.39 N N
8 C12 N3 C N doub 1.32 N Y
9 N4 C20 N C sing 1.39 N N
10 C13 N3 C N sing 1.34 N Y
11 C13 C14 C C sing 1.48 N N
12 N1 C8 N C doub 1.28 N N
13 C1 O1 C O sing 1.43 N N
14 C21 C20 C C doub 1.39 N Y
15 C21 C22 C C sing 1.36 N Y
16 C20 C25 C C sing 1.39 N Y
17 O1 C2 O C sing 1.36 N N
18 C14 C19 C C doub 1.4 N Y
19 C14 C15 C C sing 1.4 N Y
20 C19 C18 C C sing 1.38 N Y
21 C8 C15 C C sing 1.47 N N
22 C8 C7 C C sing 1.48 N N
23 C15 C16 C C doub 1.4 N Y
24 C22 C23 C C doub 1.4 N Y
25 C25 C24 C C doub 1.38 N Y
26 C18 C17 C C doub 1.39 N Y
27 C16 C17 C C sing 1.38 N Y
28 C2 C7 C C doub 1.4 N Y
29 C2 C3 C C sing 1.39 N Y
30 C7 C6 C C sing 1.4 N Y
31 C17 CL1 C CL sing 1.74 N N
32 C23 C24 C C sing 1.4 N Y
33 C23 C27 C C sing 1.47 N N
34 C24 O2 C O sing 1.36 N N
35 C3 C4 C C doub 1.38 N Y
36 O4 C27 O C doub 1.22 N N
37 C6 F1 C F sing 1.35 N N
38 C6 C5 C C doub 1.38 N Y
39 C27 O3 C O sing 1.35 N N
40 O2 C26 O C sing 1.43 N N
41 C4 C5 C C sing 1.39 N Y
42 C26 H1 C H sing 1.09 N N
43 C26 H2 C H sing 1.09 N N
44 C26 H3 C H sing 1.09 N N
45 C25 H4 C H sing 1.08 N N
46 O3 H5 O H sing 0.97 N N
47 C22 H6 C H sing 1.08 N N
48 C21 H7 C H sing 1.08 N N
49 N4 H8 N H sing 0.97 N N
50 C11 H9 C H sing 1.08 N N
51 C9 H10 C H sing 1.09 N N
52 C9 H11 C H sing 1.09 N N
53 C19 H12 C H sing 1.08 N N
54 C18 H13 C H sing 1.08 N N
55 C16 H14 C H sing 1.08 N N
56 C5 H15 C H sing 1.08 N N
57 C4 H16 C H sing 1.08 N N
58 C3 H17 C H sing 1.08 N N
59 C1 H18 C H sing 1.09 N N
60 C1 H19 C H sing 1.09 N N
61 C1 H20 C H sing 1.09 N N