Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5SL    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 C12 C C sing 1.55 N N
2 C11 C15 C C sing 1.54 N N
3 C11 C10 C C sing 1.51 N N
4 C13 C12 C C sing 1.55 N N
5 C13 C14 C C sing 1.54 N N
6 C1 C2 C C sing 1.51 N N
7 C18 N4 C N doub 1.3 N Y
8 C18 C17 C C sing 1.41 N Y
9 C15 C14 C C sing 1.54 N N
10 N4 N5 N N sing 1.4 N Y
11 N3 C14 N C sing 1.47 N N
12 N3 C16 N C sing 1.38 N N
13 C2 C7 C C doub 1.38 N Y
14 C2 C3 C C sing 1.38 N Y
15 C10 O1 C O sing 1.34 N Y
16 C10 N1 C N doub 1.31 N Y
17 O1 N2 O N sing 1.21 N Y
18 C17 C16 C C doub 1.41 N Y
19 C17 C19 C C sing 1.41 N Y
20 C7 C6 C C sing 1.38 N Y
21 C3 C4 C C doub 1.38 N Y
22 C16 N7 C N sing 1.33 N Y
23 N1 C9 N C sing 1.34 N Y
24 N5 C19 N C sing 1.36 N Y
25 C6 C5 C C doub 1.38 N Y
26 C4 C5 C C sing 1.38 N Y
27 N2 C9 N C doub 1.3 N Y
28 C19 N6 C N doub 1.33 N Y
29 C9 C8 C C sing 1.51 N N
30 C5 C8 C C sing 1.51 N N
31 N7 C20 N C doub 1.32 N Y
32 N6 C20 N C sing 1.31 N Y
33 N3 H1 N H sing 0.97 N N
34 C4 H2 C H sing 1.08 N N
35 C7 H3 C H sing 1.08 N N
36 C6 H4 C H sing 1.08 N N
37 C13 H5 C H sing 1.09 N N
38 C13 H6 C H sing 1.09 N N
39 C20 H7 C H sing 1.08 N N
40 C8 H8 C H sing 1.09 N N
41 C8 H9 C H sing 1.09 N N
42 N5 H10 N H sing 0.97 N N
43 C18 H11 C H sing 1.08 N N
44 C1 H12 C H sing 1.09 N N
45 C1 H13 C H sing 1.09 N N
46 C1 H14 C H sing 1.09 N N
47 C3 H15 C H sing 1.08 N N
48 C11 H16 C H sing 1.09 N N
49 C12 H17 C H sing 1.09 N N
50 C12 H18 C H sing 1.09 N N
51 C14 H19 C H sing 1.09 N N
52 C15 H20 C H sing 1.09 N N
53 C15 H21 C H sing 1.09 N N