Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 3JW    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C doub 1.32 N Y
2 N1 C6 N C sing 1.33 N Y
3 C2 N3 C N sing 1.32 N Y
4 NAT C6 N C sing 1.37 N Y
5 NAT CAS N C sing 1.37 N Y
6 C6 C5 C C doub 1.41 N Y
7 N3 C4 N C doub 1.33 N Y
8 CAS CAR C C doub 1.34 N Y
9 C5 C4 C C sing 1.41 N Y
10 C5 CAR C C sing 1.46 N Y
11 C4 CAM C C sing 1.48 N N
12 CAM CAN C C sing 1.41 N Y
13 CAM CAL C C doub 1.37 N Y
14 CAN NAO C N doub 1.31 N Y
15 CAL NAK C N sing 1.35 N Y
16 NAO NAK N N sing 1.4 N Y
17 NAK CAF N C sing 1.47 N N
18 CAF CAG C C sing 1.53 N N
19 CAF CAJ C C sing 1.54 N N
20 CAF CAE C C sing 1.54 N N
21 CAG CAH C C sing 1.47 N N
22 CAJ NAD C N sing 1.47 N N
23 CAE NAD C N sing 1.47 N N
24 NAD SAC N S sing 1.66 N N
25 CAA CAB C C sing 1.53 N N
26 CAH NAI C N trip 1.14 N N
27 SAC CAB S C sing 1.81 N N
28 SAC OAY S O doub 1.42 N N
29 SAC OAZ S O doub 1.42 N N
30 CAA H1 C H sing 1.09 N N
31 CAA H2 C H sing 1.09 N N
32 CAA H3 C H sing 1.09 N N
33 CAB H4 C H sing 1.09 N N
34 CAB H5 C H sing 1.09 N N
35 CAJ H6 C H sing 1.09 N N
36 CAJ H7 C H sing 1.09 N N
37 CAE H8 C H sing 1.09 N N
38 CAE H9 C H sing 1.09 N N
39 CAG H10 C H sing 1.09 N N
40 CAG H11 C H sing 1.09 N N
41 CAL H12 C H sing 1.08 N N
42 CAN H13 C H sing 1.08 N N
43 C2 H14 C H sing 1.08 N N
44 CAR H15 C H sing 1.08 N N
45 CAS H16 C H sing 1.08 N N
46 NAT H17 N H sing 0.97 N N