Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1CC    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O22 C21 O C doub 1.21 N N
2 N4 C4 N C sing 1.37 N N
3 C21 O23 C O sing 1.35 N N
4 C21 C5 C C sing 1.47 N N
5 OP1 P O P doub 1.48 N N
6 C4 C5 C C sing 1.47 N N
7 C4 N3 C N doub 1.33 N N
8 C5 C6 C C doub 1.38 N N
9 N3 C2 N C sing 1.33 N N
10 OP2 P O P sing 1.61 N N
11 C6 N1 C N sing 1.35 N N
12 P O5' P O sing 1.61 N N
13 C2 N1 C N sing 1.34 N N
14 C2 O2 C O doub 1.22 N N
15 N1 C1' N C sing 1.46 N N
16 O5' C5' O C sing 1.43 N N
17 C5' C4' C C sing 1.53 N N
18 C2' C1' C C sing 1.54 N N
19 C2' C3' C C sing 1.54 N N
20 C1' O4' C O sing 1.45 N N
21 C3' C4' C C sing 1.55 N N
22 C3' O3' C O sing 1.43 N N
23 O4' C4' O C sing 1.44 N N
24 OP2 HOP2 O H sing 0.97 N N
25 C5' H5'' C H sing 1.09 N N
26 C5' H5' C H sing 1.09 N N
27 C4' H4' C H sing 1.09 N N
28 C3' H3' C H sing 1.09 N N
29 C2' H2'' C H sing 1.09 N N
30 C2' H2' C H sing 1.09 N N
31 C1' H1' C H sing 1.09 N N
32 C6 H6 C H sing 1.08 N N
33 N4 H42 N H sing 0.97 N N
34 N4 H41 N H sing 0.97 N N
35 O23 H5 O H sing 0.97 N N
36 O3' HO3' O H sing 0.97 N N
37 P OP3 P O sing 1.61 N N
38 OP3 HOP3 O H sing 0.97 N N