Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 0ZQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 101


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C O C doub 1.21 N N
2 C O2 C O sing 1.35 N N
3 O2 CT O C sing 1.45 N N
4 CT C1 C C sing 1.53 N N
5 CT C2 C C sing 1.53 N N
6 CT C3 C C sing 1.53 N N
7 C1 H11 C H sing 1.09 N N
8 C1 H12 C H sing 1.09 N N
9 C1 H13 C H sing 1.09 N N
10 C2 H21 C H sing 1.09 N N
11 C2 H22 C H sing 1.09 N N
12 C2 H23 C H sing 1.09 N N
13 C3 H31 C H sing 1.09 N N
14 C3 H32 C H sing 1.09 N N
15 C3 H33 C H sing 1.09 N N
16 N CA N C sing 1.46 N N
17 N H N H sing 0.97 N N
18 CA C4 C C sing 1.53 N N
19 CA CB C C sing 1.53 N N
20 CA HA C H sing 1.09 N N
21 C4 CM C C sing 1.53 N N
22 C4 HC1 C H sing 1.09 N N
23 C4 HC2 C H sing 1.09 N N
24 CB CG C C sing 1.51 N N
25 CB HB1 C H sing 1.09 N N
26 CB HB2 C H sing 1.09 N N
27 CG CD1 C C doub 1.38 N Y
28 CG CD2 C C sing 1.38 N Y
29 CD1 CE1 C C sing 1.38 N Y
30 CD1 HD1 C H sing 1.08 N N
31 CD2 CE2 C C doub 1.38 N Y
32 CD2 HD2 C H sing 1.08 N N
33 CE1 CZ C C doub 1.38 N Y
34 CE1 HE1 C H sing 1.08 N N
35 CE2 CZ C C sing 1.38 N Y
36 CE2 HE2 C H sing 1.08 N N
37 CZ HZ C H sing 1.08 N N
38 CM HM1 C H sing 1.09 N N
39 CM HM2 C H sing 1.09 N N
40 N1 CA1 N C sing 1.47 N N
41 N1 H1 N H sing 1.01 N N
42 CA1 C5 C C sing 1.51 N N
43 CA1 CB1 C C sing 1.53 N N
44 CA1 HA1 C H sing 1.09 N N
45 C5 O C O doub 1.21 N N
46 CB1 CG1 C C sing 1.51 N N
47 CB1 HB21 C H sing 1.09 N N
48 CB1 HB3 C H sing 1.09 N N
49 CG1 CD11 C C doub 1.38 N Y
50 CG1 CD21 C C sing 1.38 N Y
51 CD11 CE11 C C sing 1.38 N Y
52 CD11 HD11 C H sing 1.08 N N
53 CD21 CE21 C C doub 1.38 N Y
54 CD21 HD21 C H sing 1.08 N N
55 CE11 CZ1 C C doub 1.38 N Y
56 CE11 HE11 C H sing 1.08 N N
57 CE21 CZ1 C C sing 1.38 N Y
58 CE21 HE21 C H sing 1.08 N N
59 CZ1 HZ1 C H sing 1.08 N N
60 N2 CA2 N C sing 1.46 N N
61 N2 H2 N H sing 0.97 N N
62 CA2 C6 C C sing 1.51 N N
63 CA2 CB2 C C sing 1.53 N N
64 CA2 HA2 C H sing 1.09 N N
65 C6 O3 C O doub 1.21 N N
66 CB2 CG2 C C sing 1.53 N N
67 CB2 HB22 C H sing 1.09 N N
68 CB2 HB31 C H sing 1.09 N N
69 CG2 CD C C sing 1.51 N N
70 CG2 HG2 C H sing 1.09 N N
71 CG2 HG3 C H sing 1.09 N N
72 CD OE1 C O doub 1.21 N N
73 CD OE2 C O sing 1.34 N N
74 OE2 HE22 O H sing 0.97 N N
75 N3 CA3 N C sing 1.47 N N
76 N3 H3 N H sing 0.97 N N
77 CA3 C7 C C sing 1.51 N N
78 CA3 CB3 C C sing 1.53 N N
79 CA3 HA3 C H sing 1.09 N N
80 C7 O4 C O doub 1.21 N N
81 CB3 CG3 C C sing 1.51 N N
82 CB3 HB23 C H sing 1.09 N N
83 CB3 HB32 C H sing 1.09 N N
84 CG3 CD12 C C doub 1.38 N Y
85 CG3 CD22 C C sing 1.38 N Y
86 CD12 CE12 C C sing 1.38 N Y
87 CD12 HD12 C H sing 1.08 N N
88 CD22 CE22 C C doub 1.38 N Y
89 CD22 HD22 C H sing 1.08 N N
90 CE12 CZ2 C C doub 1.38 N Y
91 CE12 HE12 C H sing 1.08 N N
92 CE22 CZ2 C C sing 1.38 N Y
93 CE22 HE23 C H sing 1.08 N N
94 CZ2 HZ2 C H sing 1.08 N N
95 N4 HN1 N H sing 0.97 N N
96 N4 HN2 N H sing 0.97 N N
97 C N C N sing 1.35 N N
98 CM N1 C N sing 1.47 N N
99 C5 N2 C N sing 1.35 N N
100 C6 N3 C N sing 1.35 N N
101 C7 N4 C N sing 1.35 N N