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PDBeChem : Atoms of Molecule
Molecule : Z9H
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 38
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
O4 |
O |
O4 |
N |
N |
N |
0 |
-0.725 |
-2.644 |
-0.308 |
2 |
C7 |
C |
C7 |
N |
N |
N |
0 |
-0.592 |
-3.698 |
0.648 |
3 |
C4 |
C |
C4 |
R |
N |
N |
0 |
-0.187 |
-1.394 |
0.128 |
4 |
C5 |
C |
C5 |
R |
N |
N |
0 |
-1.054 |
-0.25 |
-0.405 |
5 |
O5 |
O |
O5 |
N |
N |
N |
0 |
-0.482 |
1.0 |
-0.017 |
6 |
C6 |
C |
C6 |
N |
N |
N |
0 |
-2.466 |
-0.367 |
0.173 |
7 |
O6 |
O |
O6 |
N |
N |
N |
0 |
-3.306 |
0.628 |
-0.415 |
8 |
S1 |
S |
S1 |
N |
N |
N |
0 |
-4.741 |
0.604 |
0.09 |
9 |
O7 |
O |
O7 |
N |
N |
N |
0 |
-4.737 |
1.204 |
1.489 |
10 |
O8 |
O |
O8 |
N |
N |
N |
0 |
-5.471 |
1.505 |
-0.731 |
11 |
O12 |
O |
O12 |
N |
N |
N |
0 |
-5.09 |
-0.766 |
0.242 |
12 |
C3 |
C |
C3 |
S |
N |
N |
0 |
1.239 |
-1.235 |
-0.407 |
13 |
O3 |
O |
O3 |
N |
N |
N |
0 |
2.073 |
-2.257 |
0.144 |
14 |
C8 |
C |
C8 |
N |
N |
N |
0 |
3.149 |
-2.651 |
-0.709 |
15 |
C2 |
C |
C2 |
R |
N |
N |
0 |
1.776 |
0.14 |
0.001 |
16 |
O2 |
O |
O2 |
N |
N |
N |
0 |
3.079 |
0.328 |
-0.555 |
17 |
S2 |
S |
S2 |
N |
N |
N |
0 |
4.024 |
1.12 |
0.337 |
18 |
O9 |
O |
O9 |
N |
N |
N |
0 |
3.244 |
2.145 |
0.938 |
19 |
O10 |
O |
O10 |
N |
N |
N |
0 |
4.462 |
0.196 |
1.463 |
20 |
O11 |
O |
O11 |
N |
N |
N |
0 |
5.184 |
1.383 |
-0.441 |
21 |
C1 |
C |
C1 |
S |
N |
N |
0 |
0.833 |
1.224 |
-0.528 |
22 |
O1 |
O |
O1 |
N |
N |
Y |
0 |
0.804 |
1.176 |
-1.956 |
23 |
HO1 |
H |
HO1 |
N |
N |
Y |
0 |
0.225 |
1.837 |
-2.36 |
24 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-1.033 |
-3.388 |
1.595 |
25 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-1.106 |
-4.587 |
0.282 |
26 |
H13 |
H |
H13 |
N |
N |
N |
0 |
0.464 |
-3.924 |
0.795 |
27 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-0.174 |
-1.363 |
1.218 |
28 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-1.101 |
-0.306 |
-1.493 |
29 |
H61 |
H |
H61 |
N |
N |
N |
0 |
-2.867 |
-1.357 |
-0.045 |
30 |
H62 |
H |
H62 |
N |
N |
N |
0 |
-2.429 |
-0.22 |
1.253 |
31 |
HO7 |
H |
HO7 |
N |
N |
N |
0 |
-5.609 |
1.236 |
1.905 |
32 |
H3 |
H |
H3 |
N |
N |
N |
0 |
1.232 |
-1.318 |
-1.494 |
33 |
H6 |
H |
H6 |
N |
N |
N |
0 |
3.735 |
-3.429 |
-0.219 |
34 |
H7 |
H |
H7 |
N |
N |
N |
0 |
2.748 |
-3.035 |
-1.647 |
35 |
H63 |
H |
H63 |
N |
N |
N |
0 |
3.787 |
-1.791 |
-0.911 |
36 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.831 |
0.202 |
1.087 |
37 |
HO10 |
H |
HO10 |
N |
N |
N |
0 |
5.07 |
0.605 |
2.094 |
38 |
H1 |
H |
H1 |
N |
N |
N |
0 |
1.188 |
2.203 |
-0.204 |
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