Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VAD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 18


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 0.062 -0.064 -1.253
2 CA C CA R N N 0 -0.482 -0.436 0.101
3 CB C CB N N N 0 0.23 0.38 1.18
4 CG1 C CG1 N N N 0 -0.323 0.0020 2.555
5 CG2 C CG2 N N N 0 1.731 0.083 1.135
6 HA H HA N N N 0 -0.316 -1.498 0.28
7 HB H HB N N N 0 0.065 1.442 1.001
8 HG11 H 1HG1 N N N 0 0.185 0.584 3.324
9 HG12 H 2HG1 N N N 0 -1.391 0.213 2.587
10 HG13 H 3HG1 N N N 0 -0.157 -1.06 2.734
11 HG21 H 1HG2 N N N 0 1.897 -0.978 1.314
12 HG22 H 2HG2 N N N 0 2.125 0.353 0.155
13 HG23 H 3HG2 N N N 0 2.239 0.665 1.904
14 HOE H HOE N N N 0 -1.986 0.788 -0.02
15 HXT H HXT N N Y 0 1.716 0.0 -2.392
16 O O O N N N 0 -0.672 0.391 -2.096
17 OE O OE N N N 0 -1.884 -0.159 0.142
18 OXT O OXT N N Y 0 1.366 -0.238 -1.523