Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : V7A

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 64


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAA C C1 N Y N 0 -4.285 -0.35 0.631
2 CAB C C2 N Y N 0 -5.438 0.403 0.489
3 CAC C C3 N Y N 0 -5.371 1.713 0.055
4 CAD C C4 N Y N 0 -4.141 2.285 -0.235
5 CAE C C5 N Y N 0 -2.973 1.529 -0.085
6 CAF C C6 N Y N 0 -3.055 0.201 0.34
7 CAG C C7 N N N 0 -1.807 -0.632 0.46
8 CAH C C8 N N N 0 -1.654 2.116 -0.392
9 CAI C C9 N N N 0 -0.478 1.426 0.026
10 CAJ C C10 R N N 0 -0.637 0.231 0.929
11 CAK C C11 N N N 0 0.646 -0.603 0.935
12 CAL C C12 N N N 0 0.708 1.861 -0.406
13 CAM C C13 S N N 0 2.024 1.235 -0.03
14 CAN C C14 S N N 0 1.821 0.337 1.192
15 CAO C C15 S N N 0 3.086 -0.42 1.547
16 CAP C C16 N N N 0 2.465 0.36 -1.188
17 CAQ C C17 N N N 0 3.406 -0.729 -0.929
18 CAR C C18 N N N 0 3.689 -1.108 0.36
19 CAS C C19 N N N 0 -4.373 -1.775 1.112
20 CAV C C20 N N N 0 -2.745 -4.664 0.119
21 CAW C C21 N N N 0 -5.219 -2.574 -1.011
22 CBC C C22 N N N 0 4.051 -1.422 -2.056
23 OAU O O1 N N N 0 -4.002 -4.068 0.447
24 CBG C C23 N N N 0 3.604 1.081 3.375
25 CBH C C24 N N N 0 5.384 -0.11 2.246
26 NAT N N1 N N N 0 -4.144 -2.688 -0.016
27 NBD N N2 N N N 0 3.597 -2.627 -2.455
28 NBF N N3 N N N 0 4.068 0.525 2.097
29 OAX O O2 N N N 0 -4.071 3.571 -0.662
30 OAY O O3 N N N 0 -1.571 3.173 -0.993
31 OAZ O O4 N N N 0 0.729 2.927 -1.231
32 OBA O O5 N N N 0 2.997 2.244 0.248
33 OBB O O6 N N N 0 2.045 0.561 -2.309
34 OBE O O7 N N N 0 4.995 -0.909 -2.626
35 OBI O O8 N N N 0 4.535 -2.129 0.564
36 H1 H H1 N N N 0 -6.398 -0.037 0.719
37 H2 H H2 N N N 0 -6.276 2.291 -0.059
38 H3 H H3 N N N 0 -1.975 -1.433 1.181
39 H4 H H4 N N N 0 -1.567 -1.065 -0.511
40 H5 H H5 N N N 0 -0.829 0.574 1.946
41 H6 H H6 N N N 0 0.595 -1.352 1.725
42 H7 H H7 N N N 0 0.771 -1.094 -0.03
43 H8 H H8 N N N 0 1.568 0.972 2.041
44 H9 H H9 N N N 0 2.85 -1.166 2.306
45 H10 H H10 N N N 0 -3.618 -1.948 1.878
46 H11 H H11 N N N 0 -5.363 -1.957 1.531
47 H12 H H12 N N N 0 -2.718 -5.687 0.497
48 H13 H H13 N N N 0 -2.618 -4.673 -0.963
49 H14 H H14 N N N 0 -1.94 -4.088 0.574
50 H15 H H15 N N N 0 -5.193 -1.582 -1.462
51 H16 H H16 N N N 0 -5.079 -3.329 -1.785
52 H17 H H17 N N N 0 -6.182 -2.727 -0.525
53 H18 H H18 N N N 0 3.357 0.267 4.057
54 H19 H H19 N N N 0 4.392 1.695 3.812
55 H20 H H20 N N N 0 2.719 1.694 3.205
56 H25 H H25 N N N 0 4.068 -3.118 -3.146
57 H21 H H21 N N N 0 5.29 -0.999 2.87
58 H22 H H22 N N N 0 5.763 -0.394 1.264
59 H23 H H23 N N N 0 6.075 0.591 2.713
60 H24 H H24 N N N 0 2.798 -3.002 -2.052
61 H27 H H27 N N N 0 -3.981 4.218 0.051
62 H28 H H28 N N N 0 1.265 3.684 -0.957
63 H29 H H29 N N N 0 3.129 2.873 -0.475
64 H30 H H30 N N N 0 4.966 -2.505 -0.216