Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : UQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 153


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 0.845 -7.415 12.882
2 C2 C C2 N N N 0 0.223 -8.023 14.079
3 C3 C C3 N N N 0 0.921 -8.823 14.887
4 C4 C C4 N N N 0 2.343 -9.13 14.617
5 C5 C C5 N N N 0 2.987 -8.518 13.415
6 C6 C C6 N N N 0 2.279 -7.723 12.591
7 CM5 C CM5 N N N 0 4.443 -8.861 13.249
8 CM3 C CM3 N N N 0 0.51 -8.605 17.159
9 CM2 C CM2 N N N 0 -1.98 -8.654 13.729
10 C7 C C7 N N N 0 2.801 -7.095 11.342
11 C8 C C8 N N N 0 2.511 -7.928 10.127
12 C9 C C9 N N N 0 3.392 -8.447 9.249
13 C10 C C10 N N N 0 2.895 -9.234 8.063
14 C11 C C11 N N N 0 4.891 -8.243 9.304
15 C12 C C12 N N N 0 5.391 -7.023 8.52
16 C13 C C13 N N N 0 6.882 -6.841 8.587
17 C14 C C14 N N N 0 7.815 -7.237 7.699
18 C15 C C15 N N N 0 9.294 -7.012 7.846
19 C16 C C16 N N N 0 7.399 -8.023 6.468
20 C17 C C17 N N N 0 7.123 -7.141 5.247
21 C18 C C18 N N N 0 6.792 -7.984 4.046
22 C19 C C19 N N N 0 5.653 -7.979 3.325
23 C20 C C20 N N N 0 5.407 -8.861 2.132
24 C21 C C21 N N N 0 4.554 -6.985 3.648
25 C22 C C22 N N N 0 3.529 -7.458 4.689
26 C23 C C23 N N N 0 2.468 -6.435 4.99
27 C24 C C24 N N N 0 2.187 -5.886 6.189
28 C25 C C25 N N N 0 2.889 -6.25 7.469
29 C26 C C26 N N N 0 1.052 -4.888 6.326
30 C27 C C27 N N N 0 1.484 -3.495 6.802
31 C28 C C28 N N N 0 2.484 -2.856 5.88
32 C29 C C29 N N N 0 3.7 -2.359 6.18
33 C30 C C30 N N N 0 4.335 -2.38 7.542
34 C31 C C31 N N N 0 4.549 -1.746 5.085
35 C32 C C32 N N N 0 5.501 -2.759 4.445
36 C33 C C33 N N N 0 6.354 -2.107 3.394
37 C34 C C34 N N N 0 7.586 -1.587 3.549
38 C35 C C35 N N N 0 8.259 -1.619 4.896
39 C36 C C36 N N N 0 8.411 -0.995 2.428
40 C37 C C37 N N N 0 8.273 0.526 2.29
41 C38 C C38 N N N 0 6.893 0.961 1.879
42 C39 C C39 N N N 0 6.042 1.78 2.53
43 C40 C C40 N N N 0 4.673 2.161 2.038
44 C41 C C41 N N N 0 6.416 2.316 3.902
45 C42 C C42 N N N 0 6.52 3.844 4.019
46 C43 C C43 N N N 0 7.543 4.451 3.099
47 C44 C C44 N N N 0 7.372 5.437 2.196
48 C45 C C45 N N N 0 8.539 5.906 1.364
49 C46 C C46 N N N 0 6.079 6.191 1.966
50 C47 C C47 N N N 0 5.98 7.46 2.822
51 C48 C C48 N N N 0 4.693 8.185 2.547
52 C49 C C49 N N N 0 4.522 9.439 2.083
53 C50 C C50 N N N 0 3.194 10.095 1.833
54 C51 C C51 N N N 0 5.734 10.293 1.757
55 C52 C C52 N N N 0 6.253 11.096 2.958
56 C53 C C53 N N N 0 7.475 11.907 2.617
57 C54 C C54 N N N 0 8.768 11.549 2.722
58 C55 C C55 N N N 0 9.944 12.412 2.363
59 C56 C C56 N N N 0 9.14 10.189 3.252
60 O2 O O2 N N N 0 -1.103 -7.738 14.336
61 O3 O O3 N N N 0 0.369 -9.405 16.011
62 O4 O O4 N N N 0 2.967 -9.876 15.368
63 O1 O O1 N N N 0 0.187 -6.674 12.155
64 HM51 H 1HM5 N N N 0 4.796 -9.363 14.144
65 HM52 H 2HM5 N N N 0 5.01 -7.948 13.09
66 HM53 H 3HM5 N N N 0 4.561 -9.514 12.389
67 HM31 H 1HM3 N N N 0 0.563 -9.243 18.044
68 HM32 H 2HM3 N N N 0 -0.342 -7.925 17.237
69 HM33 H 3HM3 N N N 0 1.432 -8.024 17.076
70 HM21 H 1HM2 N N N 0 -2.63 -8.127 13.025
71 HM22 H 2HM2 N N N 0 -2.581 -9.148 14.496
72 HM23 H 3HM2 N N N 0 -1.395 -9.403 13.19
73 H71 H 1H7 N N N 0 3.872 -6.923 11.477
74 H72 H 2H7 N N N 0 2.322 -6.118 11.22
75 H8 H H8 N N N 0 1.453 -8.103 9.939
76 H101 H 1H10 N N N 0 1.804 -9.302 8.036
77 H102 H 2H10 N N N 0 3.284 -10.256 8.084
78 H103 H 3H10 N N N 0 3.217 -8.76 7.13
79 H111 H 1H11 N N N 0 5.173 -8.114 10.358
80 H112 H 2H11 N N N 0 5.435 -9.136 8.979
81 H121 H 1H12 N N N 0 5.017 -7.044 7.493
82 H122 H 2H12 N N N 0 4.94 -6.127 8.968
83 H13 H H13 N N N 0 7.216 -6.278 9.458
84 H151 H 1H15 N N N 0 9.67 -6.399 7.021
85 H152 H 2H15 N N N 0 9.571 -6.502 8.771
86 H153 H 3H15 N N N 0 9.824 -7.97 7.833
87 H161 H 1H16 N N N 0 6.505 -8.622 6.686
88 H162 H 2H16 N N N 0 8.19 -8.749 6.235
89 H171 H 1H17 N N N 0 8.011 -6.547 5.0
90 H172 H 2H17 N N N 0 6.33 -6.423 5.472
91 H18 H H18 N N N 0 7.584 -8.67 3.751
92 H201 H 1H20 N N N 0 6.325 -9.28 1.715
93 H202 H 2H20 N N N 0 4.937 -8.288 1.325
94 H203 H 3H20 N N N 0 4.742 -9.688 2.401
95 H211 H 1H21 N N N 0 4.018 -6.762 2.715
96 H212 H 2H21 N N N 0 4.979 -6.027 3.976
97 H221 H 1H22 N N N 0 3.026 -8.345 4.285
98 H222 H 2H22 N N N 0 4.056 -7.778 5.593
99 H23 H H23 N N N 0 1.86 -6.137 4.137
100 H251 H 1H25 N N N 0 3.433 -7.196 7.405
101 H252 H 2H25 N N N 0 2.162 -6.368 8.28
102 H253 H 3H25 N N N 0 3.598 -5.468 7.753
103 H261 H 1H26 N N N 0 0.325 -5.293 7.042
104 H262 H 2H26 N N N 0 0.505 -4.79 5.379
105 H271 H 1H27 N N N 0 1.831 -3.54 7.838
106 H272 H 2H27 N N N 0 0.597 -2.849 6.818
107 H28 H H28 N N N 0 2.145 -2.78 4.847
108 H301 H 1H30 N N N 0 5.291 -2.912 7.501
109 H302 H 2H30 N N N 0 3.727 -2.875 8.302
110 H303 H 3H30 N N N 0 4.523 -1.361 7.894
111 H311 H 1H31 N N N 0 3.888 -1.314 4.325
112 H312 H 2H31 N N N 0 5.133 -0.906 5.483
113 H321 H 1H32 N N N 0 6.104 -3.25 5.215
114 H322 H 2H32 N N N 0 4.932 -3.56 3.964
115 H33 H H33 N N N 0 5.902 -2.075 2.404
116 H361 H 1H36 N N N 0 8.187 -1.472 1.467
117 H351 H 1H35 N N N 0 9.196 -2.182 4.839
118 H352 H 2H35 N N N 0 7.635 -2.096 5.659
119 H353 H 3H35 N N N 0 8.482 -0.606 5.242
120 H362 H 2H36 N N N 0 9.466 -1.234 2.617
121 H371 H 1H37 N N N 0 8.965 0.86 1.506
122 H372 H 2H37 N N N 0 8.614 1.015 3.205
123 H38 H H38 N N N 0 6.584 0.576 0.908
124 H401 H 1H40 N N N 0 4.363 1.627 1.138
125 H402 H 2H40 N N N 0 3.924 1.946 2.808
126 H403 H 3H40 N N N 0 4.635 3.23 1.809
127 H411 H 1H41 N N N 0 5.648 1.974 4.608
128 H412 H 2H41 N N N 0 7.356 1.868 4.252
129 H421 H 1H42 N N N 0 5.53 4.289 3.905
130 H422 H 2H42 N N N 0 6.834 4.077 5.045
131 H43 H H43 N N N 0 8.55 4.053 3.229
132 H451 H 1H45 N N N 0 8.372 5.687 0.306
133 H452 H 2H45 N N N 0 9.479 5.427 1.658
134 H453 H 3H45 N N N 0 8.677 6.987 1.479
135 H461 H 1H46 N N N 0 5.24 5.522 2.198
136 H462 H 2H46 N N N 0 5.95 6.455 0.912
137 H471 H 1H47 N N N 0 5.991 7.192 3.885
138 H472 H 2H47 N N N 0 6.857 8.088 2.646
139 H48 H H48 N N N 0 3.8 7.59 2.737
140 H501 H 1H50 N N N 0 3.043 10.935 2.518
141 H502 H 2H50 N N N 0 3.15 10.477 0.807
142 H503 H 3H50 N N N 0 2.346 9.419 1.95
143 H511 H 1H51 N N N 0 5.471 10.986 0.948
144 H512 H 2H51 N N N 0 6.546 9.672 1.355
145 H521 H 1H52 N N N 0 5.47 11.798 3.27
146 H522 H 2H52 N N N 0 6.415 10.439 3.817
147 H53 H H53 N N N 0 7.251 12.905 2.241
148 H551 H 1H55 N N N 0 9.667 13.411 2.023
149 H552 H 2H55 N N N 0 10.525 11.941 1.563
150 H553 H 3H55 N N N 0 10.596 12.536 3.233
151 H561 H 1H56 N N N 0 9.75 10.289 4.156
152 H562 H 2H56 N N N 0 9.716 9.635 2.503
153 H563 H 3H56 N N N 0 8.263 9.586 3.509