Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : UBC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 5.156 -1.245 -0.173
2 C1 C C1 N Y N 0 -0.222 2.047 0.672
3 C10 C C10 N N N 0 -4.147 -1.189 1.123
4 C17 C C17 N N N 0 -1.518 -0.0030 0.894
5 C2 C C2 N Y N 0 0.969 2.724 0.318
6 C21 C C21 N Y N 0 -2.465 -0.0020 -0.278
7 C22 C C22 N Y N 0 -3.73 -0.58 -0.156
8 C23 C C23 N Y N 0 -4.604 -0.569 -1.246
9 C24 C C24 N Y N 0 -4.208 0.0010 -2.437
10 C25 C C25 N Y N 0 -2.95 0.567 -2.553
11 C26 C C26 N Y N 0 -2.082 0.565 -1.477
12 C3 C C3 N Y N 0 2.014 2.012 -0.156
13 C5 C C5 N Y N 0 0.764 0.023 0.05
14 CA C CA S N N 0 3.928 -0.557 0.364
15 CB C CB N N N 0 3.037 -0.119 -0.801
16 H171 H 1H17 N N N 0 -1.276 -1.031 1.164
17 H172 H 2H17 N N N 0 -1.989 0.495 1.742
18 H2 H H2 N N N 0 1.042 3.796 0.425
19 H23 H H23 N N N 0 -5.586 -1.011 -1.156
20 H24 H H24 N N N 0 -4.881 0.0060 -3.282
21 H25 H H25 N N N 0 -2.646 1.013 -3.489
22 H26 H H26 N N N 0 -1.102 1.008 -1.574
23 H3 H H3 N N N 0 2.931 2.511 -0.432
24 HA H HA N N N 0 3.376 -1.245 1.005
25 HB1 H 1HB N N N 0 3.616 0.497 -1.488
26 HB2 H 2HB N N N 0 2.667 -1.0 -1.326
27 HN1 H 1HN N N N 0 4.833 1.228 0.513
28 HN2 H 2HN N N N 0 3.48 1.107 1.394
29 HO H HO N N N 0 5.878 -2.971 -0.905
30 HO1 H HO1 N N N 0 -5.596 -2.239 2.045
31 N N N N N N 0 4.329 0.622 1.143
32 N4 N N4 N Y N 0 1.904 0.654 -0.286
33 N6 N N6 N Y N 0 -0.29 0.708 0.53
34 O O O N N N 0 5.09 -2.529 -0.561
35 O1 O O1 N N N 0 -5.324 -1.84 1.208
36 O2 O O2 N N N 0 -3.429 -1.104 2.099
37 O7 O O7 N N N 0 -1.178 2.669 1.102
38 O8 O O8 N N N 0 0.689 -1.184 -0.073
39 OXT O OXT N N N 0 6.199 -0.642 -0.255