Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : UBA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OXT O OXT N N N 0 5.696 -1.582 0.386
2 C C C N N N 0 4.627 -1.898 -0.08
3 O O O N N N 0 4.528 -2.99 -0.854
4 CA C CA S N N 0 3.404 -1.065 0.207
5 N N N N N N 0 3.638 -0.25 1.407
6 CB C CB N N N 0 3.12 -0.148 -0.984
7 N4 N N4 N Y N 0 2.005 0.745 -0.658
8 C5 C C5 N Y N 0 0.744 0.365 -0.934
9 O8 O O8 N N N 0 0.544 -0.717 -1.452
10 N6 N N6 N Y N 0 -0.298 1.165 -0.645
11 C1 C C1 N Y N 0 -0.094 2.366 -0.066
12 O7 O O7 N N N 0 -1.037 3.091 0.195
13 C2 C C2 N Y N 0 1.228 2.78 0.225
14 C6 C C6 N N N 0 1.485 4.119 0.867
15 C3 C C3 N Y N 0 2.256 1.957 -0.075
16 C17 C C17 N N N 0 -1.662 0.728 -0.955
17 C18 C C18 N Y N 0 -2.198 -0.094 0.189
18 C23 C C23 N Y N 0 -1.492 -0.243 1.356
19 C22 C C22 N Y N 0 -2.019 -0.995 2.359
20 S20 S S20 N Y N 0 -3.533 -1.525 1.703
21 C19 C C19 N Y N 0 -3.429 -0.728 0.11
22 C10 C C10 N N N 0 -4.39 -0.744 -0.994
23 O2 O O2 N N N 0 -5.588 -1.345 -0.838
24 O1 O O1 N N N 0 -4.108 -0.216 -2.053
25 HO H HO N N N 0 5.312 -3.525 -1.039
26 HA H HA N N N 0 2.549 -1.72 0.374
27 HN1 H 1HN N N N 0 3.922 -0.885 2.138
28 HN2 H 2HN N N N 0 4.434 0.337 1.208
29 HB1 H 1HB N N N 0 2.859 -0.752 -1.853
30 HB2 H 2HB N N N 0 4.007 0.445 -1.206
31 H61 H 1H6 N N N 0 1.621 4.873 0.093
32 H62 H 2H6 N N N 0 0.635 4.39 1.494
33 H63 H 3H6 N N N 0 2.384 4.061 1.481
34 H3 H H3 N N N 0 3.271 2.254 0.143
35 H171 H 1H17 N N N 0 -2.298 1.6 -1.105
36 H172 H 2H17 N N N 0 -1.652 0.124 -1.863
37 H23 H H23 N N N 0 -0.529 0.23 1.476
38 H22 H H22 N N N 0 -1.596 -1.21 3.329
39 HO2 H HO2 N N N 0 -6.222 -1.355 -1.568