Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PLM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 0.142 0.0010 -8.19
2 O1 O O1 N N Y 0 -0.449 -0.0040 -9.395
3 O2 O O2 N N N 0 1.347 0.014 -8.109
4 C2 C C2 N N N 0 -0.697 -0.0070 -6.939
5 C3 C C3 N N N 0 0.215 0.0020 -5.711
6 C4 C C4 N N N 0 -0.636 -0.0070 -4.441
7 C5 C C5 N N N 0 0.276 0.0030 -3.214
8 C6 C C6 N N N 0 -0.576 -0.0060 -1.943
9 C7 C C7 N N N 0 0.337 0.0030 -0.716
10 C8 C C8 N N N 0 -0.515 -0.0050 0.553
11 C9 C C9 N N N 0 0.398 0.0040 1.781
12 CA C CA N N N 0 -0.454 -0.0050 3.051
13 CB C CB N N N 0 0.459 0.0050 4.279
14 CC C CC N N N 0 -0.393 -0.0040 5.549
15 CD C CD N N N 0 0.52 0.0050 6.776
16 CE C CE N N N 0 -0.332 -0.0030 8.047
17 CF C CF N N N 0 0.58 0.0060 9.274
18 CG C CG N N N 0 -0.271 -0.0030 10.544
19 H H H N N N 0 0.089 0.0010 -10.198
20 H21 H 1H2 N N N 0 -1.317 -0.904 -6.923
21 H22 H 2H2 N N N 0 -1.336 0.875 -6.923
22 H31 H 1H3 N N N 0 0.835 0.899 -5.727
23 H32 H 2H3 N N N 0 0.854 -0.88 -5.727
24 H41 H 1H4 N N N 0 -1.256 -0.903 -4.426
25 H42 H 2H4 N N N 0 -1.275 0.876 -4.426
26 H51 H 1H5 N N N 0 0.896 0.899 -3.229
27 H52 H 2H5 N N N 0 0.915 -0.88 -3.229
28 H61 H 1H6 N N N 0 -1.195 -0.903 -1.928
29 H62 H 2H6 N N N 0 -1.214 0.876 -1.928
30 H71 H 1H7 N N N 0 0.956 0.9 -0.731
31 H72 H 2H7 N N N 0 0.976 -0.879 -0.731
32 H81 H 1H8 N N N 0 -1.134 -0.902 0.569
33 H82 H 2H8 N N N 0 -1.154 0.877 0.569
34 H91 H 1H9 N N N 0 1.017 0.901 1.766
35 H92 H 2H9 N N N 0 1.037 -0.878 1.766
36 HA1 H 1HA N N N 0 -1.073 -0.901 3.067
37 HA2 H 2HA N N N 0 -1.093 0.878 3.067
38 HB1 H 1HB N N N 0 1.078 0.901 4.263
39 HB2 H 2HB N N N 0 1.098 -0.878 4.263
40 HC1 H 1HC N N N 0 -1.012 -0.901 5.564
41 HC2 H 2HC N N N 0 -1.032 0.878 5.564
42 HD1 H 1HD N N N 0 1.139 0.902 6.761
43 HD2 H 2HD N N N 0 1.158 -0.877 6.761
44 HE1 H 1HE N N N 0 -0.952 -0.9 8.062
45 HE2 H 2HE N N N 0 -0.971 0.879 8.062
46 HF1 H 1HF N N N 0 1.2 0.903 9.259
47 HF2 H 2HF N N N 0 1.219 -0.876 9.259
48 HG1 H 1HG N N N 0 0.379 0.0040 11.419
49 HG2 H 2HG N N N 0 -0.91 0.88 10.56
50 HG3 H 3HG N N N 0 -0.891 -0.899 10.56