Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : PEQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 17


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -2.039 -0.37 -0.048
2 O1 O O1 N N N 0 -2.007 -1.261 -0.863
3 O2' O O2' N N N 0 -3.094 -0.249 0.773
4 C2 C C2 S N N 0 -0.895 0.606 0.047
5 C3 C C3 N N N 0 -1.383 2.004 -0.34
6 O2 O O2 N N N 0 0.149 0.203 -0.842
7 P P P N N N 0 1.456 -0.055 0.063
8 O1P O O1P N N N 0 1.75 1.155 0.863
9 O2P O O2P N N N 0 1.188 -1.299 1.05
10 O3P O O3P N N N 0 2.711 -0.386 -0.89
11 HO2 H HO2 N N N 0 -3.828 -0.875 0.713
12 H21 H 1H2 N N N 0 -0.516 0.624 1.069
13 H31 H 1H3 N N N 0 -1.762 1.986 -1.362
14 H32 H 2H3 N N N 0 -2.18 2.311 0.338
15 H33 H 3H3 N N N 0 -0.555 2.709 -0.271
16 HOP2 H 2HOP N N N 0 1.001 -2.064 0.49
17 HOP3 H 3HOP N N N 0 3.471 -0.534 -0.31