Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : P0H

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.381 -0.937 0.266
2 O1 O O1 N N N 0 1.344 -2.047 0.76
3 O2 O O2 N N N 0 2.565 -0.331 0.058
4 C2 C C2 N N N 0 3.757 -1.063 0.449
5 C3 C C3 N Y N 0 4.978 -0.233 0.144
6 C4 C C4 N Y N 0 5.593 -0.337 -1.09
7 C5 C C5 N Y N 0 6.713 0.424 -1.37
8 C6 C C6 N Y N 0 7.217 1.288 -0.416
9 C7 C C7 N Y N 0 6.602 1.393 0.817
10 C8 C C8 N Y N 0 5.479 0.635 1.096
11 N1 N N1 N N N 0 0.236 -0.313 -0.075
12 CA1 C CA1 N N N 0 -1.053 -0.973 0.151
13 C9 C C9 N N N 0 -2.167 -0.07 -0.313
14 O3 O O3 N N N 0 -1.91 1.017 -0.785
15 N N N N N N 0 -3.449 -0.47 -0.203
16 CA C CA S N N 0 -4.628 0.306 -0.613
17 C C C N N N 0 -4.699 1.587 0.179
18 O O O N N N 0 -3.856 1.831 1.01
19 CB C CB N N N 0 -5.871 -0.56 -0.323
20 CG C CG N N N 0 -5.292 -1.999 -0.291
21 CD C CD N N N 0 -3.901 -1.763 0.344
22 OXT O OXT N N N 0 -5.702 2.453 -0.035
23 H2 H H2 N N N 0 3.72 -1.274 1.518
24 H2A H H2A N N N 0 3.807 -2.0 -0.105
25 H4 H H4 N N N 0 5.199 -1.012 -1.834
26 H5 H H5 N N N 0 7.194 0.342 -2.333
27 H6 H H6 N N N 0 8.093 1.882 -0.635
28 H7 H H7 N N N 0 6.996 2.068 1.562
29 H8 H H8 N N N 0 4.996 0.719 2.058
30 HN1 H HN1 N N N 0 0.265 0.572 -0.469
31 HA1 H HA1 N N N 0 -1.086 -1.907 -0.409
32 HA1A H HA1A N N N 0 -1.173 -1.181 1.214
33 HA H HA N N N 0 -4.57 0.532 -1.678
34 HB H HB N N N 0 -6.308 -0.298 0.641
35 HBA H HBA N N N 0 -6.607 -0.458 -1.121
36 HG H HG N N N 0 -5.902 -2.652 0.333
37 HGA H HGA N N N 0 -5.194 -2.404 -1.298
38 HD H HD N N N 0 -3.213 -2.558 0.057
39 HDA H HDA N N N 0 -3.985 -1.707 1.429
40 HOXT H HOXT N N N 0 -5.708 3.258 0.5