Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : NNR

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2R O O2R N N N 0 -0.834 2.397 -0.881
2 C2R C C2R R N N 0 -1.343 1.063 -0.833
3 C3R C C3R S N N 0 -2.855 1.06 -0.503
4 O3R O O3R N N N 0 -3.234 2.291 0.116
5 C4R C C4R R N N 0 -3.025 -0.114 0.481
6 C5R C C5R N N N 0 -4.023 -1.127 -0.085
7 O5R O O5R N N N 0 -4.262 -2.151 0.882
8 O4R O O4R N N N 0 -1.736 -0.731 0.636
9 C1R C C1R R N N 0 -0.747 0.286 0.368
10 N1 N N1 N Y N 1 0.534 -0.324 0.004
11 C2 C C2 N Y N 0 1.652 0.271 0.366
12 C6 C C6 N Y N 0 0.535 -1.457 -0.673
13 C5 C C5 N Y N 0 1.72 -2.069 -1.038
14 C4 C C4 N Y N 0 2.923 -1.482 -0.686
15 C3 C C3 N Y N 0 2.889 -0.283 0.035
16 C7 C C7 N N N 0 4.144 0.388 0.437
17 O7 O O7 N N N 0 4.103 1.429 1.064
18 N7 N N7 N N N 0 5.333 -0.154 0.109
19 HO2R H HO2R N N N 0 -1.243 2.95 -1.56
20 H2R H H2R N N N 0 -1.148 0.541 -1.77
21 H3R H H3R N N N 0 -3.443 0.89 -1.406
22 HO3R H HO3R N N N 0 -4.173 2.344 0.345
23 H4R H H4R N N N 0 -3.379 0.257 1.443
24 H5R1 H 1H5R N N N 0 -4.96 -0.622 -0.319
25 H5R2 H 2H5R N N N 0 -3.613 -1.572 -0.992
26 HO5R H HO5R N N N 0 -4.886 -2.829 0.591
27 H1R H H1R N N N 0 -0.629 0.943 1.23
28 H2 H H2 N N N 0 1.61 1.195 0.923
29 H6 H H6 N N N 0 -0.405 -1.913 -0.947
30 H5 H H5 N N N 0 1.707 -2.997 -1.592
31 H4 H H4 N N N 0 3.863 -1.938 -0.958
32 HN71 H 1HN7 N N N 0 5.366 -0.985 -0.391
33 HN72 H 2HN7 N N N 0 6.157 0.285 0.373