Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : MBG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 1.169 0.185 -0.327
2 C2 C C2 R N N 0 0.257 -0.132 -1.514
3 C3 C C3 S N N 0 -1.092 0.565 -1.307
4 C4 C C4 R N N 0 -1.645 0.165 0.064
5 C5 C C5 R N N 0 -0.589 0.459 1.133
6 C6 C C6 N N N 0 -1.145 0.092 2.51
7 C7 C C7 N N N 0 3.245 -0.099 0.606
8 H1 H H1 N N N 0 1.3 1.265 -0.249
9 H2 H H2 N N N 0 0.104 -1.209 -1.58
10 H3 H H3 N N N 0 -0.955 1.646 -1.345
11 H4 H H4 N N N 0 -2.547 0.739 0.276
12 H5 H H5 N N N 0 -0.339 1.519 1.113
13 H61 H H61 N N N 0 -2.042 0.679 2.707
14 H62 H H62 N N N 0 -1.393 -0.968 2.531
15 H71 H H71 N N N 0 4.231 -0.552 0.498
16 H72 H H72 N N N 0 3.349 0.983 0.672
17 H73 H H73 N N N 0 2.77 -0.475 1.512
18 HO2 H HO2 N N Y 0 1.703 -0.122 -2.811
19 HO3 H HO3 N N Y 0 -1.619 0.432 -3.173
20 HO4 H HO4 N N Y 0 -2.621 -1.37 -0.616
21 HO6 H HO6 N N Y 0 -0.553 0.128 4.36
22 O1 O O1 N N N 0 2.441 -0.433 -0.526
23 O2 O O2 N N N 0 0.859 0.34 -2.72
24 O3 O O3 N N N 0 -2.005 0.161 -2.329
25 O4 O O4 N N N 0 -1.954 -1.23 0.069
26 O5 O O5 N N N 0 0.584 -0.309 0.876
27 O6 O O6 N N N 0 -0.163 0.372 3.51