Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : M3L

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 2.673 -1.806 -0.237
2 CA C CA S N N 0 2.588 -0.365 -0.509
3 CB C CB N N N 0 1.322 0.202 0.136
4 CG C CG N N N 0 0.09 -0.41 -0.535
5 CD C CD N N N 0 -1.176 0.157 0.11
6 CE C CE N N N 0 -2.408 -0.455 -0.56
7 NZ N NZ N N N 1 -3.623 0.09 0.059
8 C C C N N N 0 3.798 0.327 0.065
9 O O O N N N 0 4.447 -0.211 0.93
10 OXT O OXT N N Y 0 4.153 1.541 -0.384
11 CM1 C CM1 N N N 0 -3.648 1.549 -0.111
12 CM2 C CM2 N N N 0 -3.632 -0.237 1.491
13 CM3 C CM3 N N N 0 -4.806 -0.498 -0.585
14 H H 1HN N N N 0 2.704 -1.91 0.766
15 H2 H 2HN N N Y 0 1.802 -2.211 -0.544
16 HA H HA N N N 0 2.553 -0.2 -1.586
17 HB2 H 1HB N N N 0 1.304 1.285 0.01
18 HB3 H 2HB N N N 0 1.315 -0.04 1.198
19 HG2 H 1HG N N N 0 0.109 -1.492 -0.409
20 HG3 H 2HG N N N 0 0.097 -0.167 -1.598
21 HD2 H 1HD N N N 0 -1.194 1.24 -0.016
22 HD3 H 2HD N N N 0 -1.182 -0.085 1.173
23 HE2 H 1HE N N N 0 -2.389 -1.537 -0.435
24 HE3 H 2HE N N N 0 -2.401 -0.212 -1.623
25 HXT H HXT N N Y 0 4.929 1.985 -0.016
26 HM11 H 1HM1 N N N 0 -2.771 1.985 0.367
27 HM12 H 2HM1 N N N 0 -3.641 1.791 -1.173
28 HM13 H 3HM1 N N N 0 -4.55 1.953 0.349
29 HM21 H 1HM2 N N N 0 -4.534 0.167 1.95
30 HM22 H 2HM2 N N N 0 -3.614 -1.32 1.616
31 HM23 H 3HM2 N N N 0 -2.755 0.199 1.968
32 HM31 H 1HM3 N N N 0 -4.799 -0.255 -1.648
33 HM32 H 2HM3 N N N 0 -4.788 -1.581 -0.459
34 HM33 H 3HM3 N N N 0 -5.708 -0.094 -0.126