Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LDH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 2.5 1.782 0.079
2 CA C CA S N N 0 2.448 0.362 0.45
3 CB C CB N N N 0 1.217 -0.287 -0.186
4 CG C CG N N N 0 -0.049 0.333 0.407
5 CD C CD N N N 0 -1.281 -0.315 -0.229
6 CE C CE N N N 0 -2.547 0.305 0.364
7 NZ N NZ N N N 0 -3.729 -0.318 -0.247
8 CH C CH N N N 0 -4.967 0.254 0.299
9 C1 C C1 N N N 0 -6.174 -0.418 -0.359
10 C C C N N N 0 3.693 -0.332 -0.042
11 O O O N N N 0 4.351 0.164 -0.925
12 OXT O OXT N N Y 0 4.069 -1.5 0.501
13 H H HN1 N N N 0 3.269 2.248 0.539
14 H2 H HN2 N N Y 0 2.558 1.893 -0.922
15 HA H HA N N N 0 2.387 0.272 1.535
16 HB1 H HB1 N N N 0 1.234 -0.119 -1.263
17 HB2 H HB2 N N N 0 1.226 -1.358 0.015
18 HG1 H HG1 N N N 0 -0.066 0.166 1.484
19 HG2 H HG2 N N N 0 -0.058 1.405 0.206
20 HD1 H HD1 N N N 0 -1.264 -0.147 -1.306
21 HD2 H HD2 N N N 0 -1.272 -1.387 -0.028
22 HE1 H HE1 N N N 0 -2.564 0.137 1.441
23 HE2 H HE2 N N N 0 -2.556 1.376 0.163
24 HNZ H HNZ N N N 0 -3.704 -0.232 -1.252
25 HH1 H HH1 N N N 0 -5.001 0.086 1.376
26 HH2 H HH2 N N N 0 -4.993 1.325 0.098
27 H11 H H11 N N N 0 -6.14 -0.25 -1.436
28 H12 H H12 N N N 0 -6.148 -1.489 -0.158
29 H13 H H13 N N N 0 -7.092 0.006 0.046
30 HXT H HXT N N Y 0 4.874 -1.907 0.152