Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : KXV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C14 N N N 0 -4.14 -1.67 -0.634
2 C1 C C3 N N N 0 -1.658 0.091 0.646
3 C2 C C4 N N N 0 -1.082 -2.033 0.526
4 CA1 C C2 R N N 0 -2.525 1.319 0.76
5 CA2 C C5 N N N 0 0.106 -1.165 0.466
6 CA3 C C6 N N N 0 -3.54 -1.583 0.746
7 CB1 C C1 N N N 0 -2.836 1.856 -0.639
8 CB2 C C7 N N N 0 1.421 -1.561 0.348
9 CD1 C C9 N Y N 0 3.795 -0.961 -0.069
10 CD2 C C10 N Y N 0 2.169 0.807 0.268
11 CE1 C C11 N Y N 0 4.783 -0.011 -0.23
12 CE2 C C12 N Y N 0 3.163 1.746 0.111
13 CF C C15 N N N 0 6.314 -1.803 -0.555
14 CG2 C C8 N Y N 0 2.476 -0.559 0.182
15 CZ C C13 N Y N 0 4.469 1.345 -0.143
16 H1 H H16 N N N 0 5.566 2.566 -1.217
17 H2 H H18 N N N 0 6.045 -2.271 0.392
18 H3 H H19 N N N 0 5.716 -2.235 -1.357
19 H4 H H20 N N N 0 7.371 -1.973 -0.757
20 HA1 H H7 N N N 0 -3.456 1.06 1.265
21 HA31 H H9 N N N 0 -3.611 -2.555 1.234
22 HA32 H H10 N N N 0 -4.082 -0.841 1.332
23 HB11 H H5 N N N 0 -3.36 1.092 -1.213
24 HB12 H H6 N N N 0 -1.905 2.114 -1.144
25 HB2 H H11 N N N 0 1.673 -2.611 0.379
26 HD1 H H13 N N N 0 4.037 -2.012 -0.136
27 HD2 H H14 N N N 0 1.153 1.121 0.456
28 HE2 H H15 N N N 0 2.926 2.797 0.177
29 HG1 H H4 N N N 0 -4.069 3.69 -1.785
30 HN1 H H1 N N N 0 -1.658 2.042 2.481
31 HN2 H H2 N N Y 0 -0.951 2.605 1.086
32 HXT H HXT N N Y 0 -5.769 -2.058 -1.689
33 N N N1 N N N 0 -1.818 2.348 1.533
34 N2 N N2 N N N 0 -0.366 0.116 0.544
35 N3 N N3 N N N 0 -2.132 -1.19 0.642
36 O O O3 N N N 0 -3.462 -1.428 -1.604
37 O2 O O1 N N N 0 -1.112 -3.25 0.487
38 O4 O O4 N N N 0 6.063 -0.398 -0.479
39 OH O O2 N N N 0 5.444 2.277 -0.302
40 OXT O OXT N N Y 0 -5.429 -2.016 -0.785
41 SG1 S S1 N N N 0 -3.879 3.333 -0.502