Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : I2M

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 25


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 0.436 1.91 0.548
2 CA C CA S N N 0 0.464 0.448 0.693
3 CB C CB N N N 0 -0.746 -0.158 -0.02
4 CG3 C CG3 N N N 0 -0.699 0.208 -1.505
5 CG2 C CG2 N N N 0 -0.717 -1.681 0.131
6 CG1 C CG1 N N N 0 -2.032 0.391 0.6
7 CD1 C CD1 N N N 0 -3.242 -0.215 -0.113
8 C C C N N N 0 1.731 -0.093 0.082
9 O O O N N N 0 2.344 0.568 -0.722
10 OXT O OXT N N Y 0 2.177 -1.31 0.43
11 H H H N N N 0 0.467 2.177 -0.424
12 H2 H H2 N N Y 0 -0.372 2.303 1.007
13 HA H HA N N N 0 0.431 0.187 1.751
14 HG31 H HG31 N N N 0 0.217 -0.184 -1.947
15 HG32 H HG32 N N N 0 -1.561 -0.224 -2.013
16 HG23 H HG23 N N N 0 0.199 -2.072 -0.311
17 HG33 H HG33 N N N 0 -0.72 1.293 -1.612
18 HG21 H HG21 N N N 0 -0.751 -1.941 1.189
19 HG22 H HG22 N N N 0 -1.579 -2.112 -0.377
20 HG12 H HG12 N N N 0 -2.065 0.131 1.658
21 HG13 H HG13 N N N 0 -2.053 1.476 0.493
22 HD11 H HD11 N N N 0 -3.209 0.046 -1.171
23 HD12 H HD12 N N N 0 -3.222 -1.299 -0.005
24 HD13 H HD13 N N N 0 -4.158 0.177 0.329
25 HXT H HXT N N Y 0 2.994 -1.615 0.012