Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : G50

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.214 -0.337 1.092
2 C2 C C2 N N N 0 1.59 0.974 1.385
3 C3 C C3 N N N 0 2.744 1.219 2.129
4 C4 C C4 N N N 0 3.523 0.153 2.58
5 C5 C C5 N N N 0 3.147 -1.158 2.286
6 C6 C C6 N N N 0 1.993 -1.403 1.542
7 C7 C C7 N N N 0 3.961 -2.273 2.757
8 C8 C C8 N N N 0 3.672 -2.905 4.129
9 C9 C C9 N N N 0 4.913 -3.514 4.787
10 O1 O O1 N N N 0 1.607 -2.676 1.245
11 O2 O O2 N N N 0 4.889 -2.721 2.056
12 C10 C C10 N N N 0 4.589 -4.13 6.123
13 C11 C C11 N N N 0 4.672 -3.354 7.27
14 C12 C C12 N N N 0 4.373 -3.924 8.507
15 C13 C C13 N N N 0 3.993 -5.265 8.584
16 C14 C C14 N N N 0 3.913 -6.034 7.423
17 C15 C C15 N N N 0 4.213 -5.464 6.186
18 O3 O O3 N N N 0 3.703 -5.822 9.791
19 O4 O O4 N N N 0 0.83 2.014 0.945
20 O5 O O5 N N N 0 4.648 0.414 3.304
21 H3 H H3 N N N 0 3.036 2.241 2.356
22 H1 H H1 N N N 0 0.314 -0.527 0.512
23 H4 H H4 N N N 0 1.122 2.294 0.063
24 HA H HA N N N 0 0.7 -2.678 0.901
25 H5 H H5 N N N 0 5.137 -0.406 3.47
26 H9C2 H 2H9C N N N 0 5.689 -2.748 4.917
27 H8C1 H 1H8C N N N 0 3.262 -2.125 4.78
28 H8C2 H 2H8C N N N 0 2.916 -3.687 3.988
29 H9C1 H 1H9C N N N 0 5.357 -4.274 4.131
30 H11 H H11 N N N 0 4.967 -2.309 7.221
31 H15 H H15 N N N 0 4.148 -6.071 5.287
32 H12 H H12 N N N 0 4.437 -3.32 9.408
33 H14 H H14 N N N 0 3.619 -7.079 7.477
34 HB H HB N N N 0 4.218 -5.392 10.493