Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : F8V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 82


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 2.075 -3.054 1.304
2 C20 C C1 N N N 0 2.392 -2.631 0.212
3 N4 N N1 N N N 0 3.695 -2.51 -0.111
4 C24 C C2 N N N 0 4.101 -1.992 -1.427
5 C23 C C3 N N N 0 5.116 -0.865 -1.214
6 N5 N N2 N N N 0 6.216 -1.353 -0.371
7 C25 C C4 N Y N 0 7.239 -0.41 -0.289
8 C30 C C5 N Y N 0 7.119 0.805 -0.956
9 C29 C C6 N Y N 0 8.128 1.739 -0.876
10 C28 C C7 N Y N 0 9.272 1.466 -0.124
11 C31 C C8 N Y N 0 10.359 2.469 -0.036
12 N7 N N3 N Y N 0 10.226 3.625 -0.673
13 C34 C C9 N Y N 0 11.177 4.542 -0.614
14 C33 C C10 N Y N 0 12.322 4.282 0.124
15 C32 C C11 N Y N 0 12.428 3.064 0.778
16 N6 N N4 N Y N 0 11.439 2.193 0.683
17 C27 C C12 N Y N 0 9.39 0.247 0.544
18 C26 C C13 N Y N 0 8.376 -0.682 0.465
19 C22 C C14 N N N 0 5.738 -1.728 0.966
20 C21 C C15 N N N 0 4.748 -2.886 0.844
21 C19 C C16 N N N 0 1.329 -2.245 -0.784
22 N N N5 N N N 0 0.0020 -2.474 -0.198
23 C1 C C17 N N N 0 -0.32 -3.924 -0.158
24 C2 C C18 N N N 0 -1.859 -3.978 -0.051
25 C3 C C19 S N N 0 -2.349 -2.638 -0.637
26 C C C20 N N N 0 -1.064 -1.887 -1.049
27 S S S1 N N N 0 -3.4 -2.931 -2.087
28 C18 C C21 N N N 0 -4.738 -3.958 -1.42
29 C4 C C22 N N N 0 -3.102 -1.854 0.407
30 O O O2 N N N 0 -3.056 -2.194 1.57
31 N1 N N6 N N N 0 -3.826 -0.775 0.048
32 C5 C C23 N Y N 0 -4.673 -0.159 0.978
33 C10 C C24 N Y N 0 -5.769 0.558 0.54
34 C9 C C25 N Y N 0 -6.608 1.17 1.474
35 C11 C C26 N Y N 0 -7.824 1.984 1.369
36 N2 N N7 N Y N 0 -8.197 2.296 2.586
37 N3 N N8 N Y N 0 -7.309 1.744 3.515
38 C8 C C27 N Y N 0 -6.33 1.05 2.848
39 C7 C C28 N Y N 0 -5.218 0.322 3.264
40 C6 C C29 N Y N 0 -4.408 -0.276 2.342
41 C12 C C30 N Y N 0 -8.506 2.382 0.115
42 C17 C C31 N Y N 0 -7.76 2.651 -1.032
43 C16 C C32 N Y N 0 -8.399 3.021 -2.197
44 C15 C C33 N Y N 0 -9.781 3.124 -2.229
45 F F F1 N N N 0 -10.402 3.486 -3.373
46 C14 C C34 N Y N 0 -10.526 2.857 -1.092
47 C13 C C35 N Y N 0 -9.896 2.482 0.076
48 H28 H H1 N N N 0 4.559 -2.792 -2.009
49 H27 H H2 N N N 0 3.228 -1.608 -1.955
50 H26 H H3 N N N 0 5.511 -0.544 -2.178
51 H25 H H4 N N N 0 4.628 -0.023 -0.722
52 H32 H H5 N N N 0 6.234 1.016 -1.538
53 H31 H H6 N N N 0 8.035 2.682 -1.394
54 H35 H H7 N N N 0 11.064 5.481 -1.136
55 H34 H H8 N N N 0 13.114 5.014 0.189
56 H33 H H9 N N N 0 13.307 2.832 1.362
57 H30 H H10 N N N 0 10.275 0.034 1.126
58 H29 H H11 N N N 0 8.465 -1.624 0.985
59 H24 H H12 N N N 0 6.583 -2.034 1.582
60 H23 H H13 N N N 0 5.241 -0.875 1.427
61 H22 H H14 N N N 0 4.303 -3.089 1.819
62 H21 H H15 N N N 0 5.269 -3.773 0.484
63 H19 H H16 N N N 0 1.436 -1.191 -1.04
64 H20 H H17 N N N 0 1.438 -2.85 -1.684
65 H4 H H19 N N N 0 0.015 -4.413 -1.073
66 H5 H H20 N N N 0 0.14 -4.392 0.712
67 H6 H H21 N N N 0 -2.25 -4.812 -0.635
68 H7 H H22 N N N 0 -2.163 -4.069 0.992
69 H2 H H23 N N N 0 -1.167 -0.82 -0.848
70 H3 H H24 N N N 0 -0.846 -2.057 -2.103
71 H18 H H25 N N N 0 -5.396 -4.268 -2.231
72 H17 H H26 N N N 0 -4.314 -4.839 -0.939
73 H16 H H27 N N N 0 -5.307 -3.384 -0.689
74 H8 H H28 N N N 0 -3.761 -0.426 -0.855
75 H11 H H29 N N N 0 -5.976 0.646 -0.516
76 H1 H H30 N N N 0 -7.375 1.837 4.478
77 H10 H H31 N N N 0 -4.999 0.227 4.317
78 H9 H H32 N N N 0 -3.547 -0.839 2.673
79 H15 H H33 N N N 0 -6.683 2.571 -1.008
80 H14 H H34 N N N 0 -7.822 3.23 -3.086
81 H13 H H35 N N N 0 -11.603 2.939 -1.122
82 H12 H H36 N N N 0 -10.478 2.27 0.961