Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : DCK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N N N 0 -2.115 0.097 -1.538
2 N02 N N02 N N N 1 -2.247 -0.133 -0.093
3 C03 C C03 N N N 0 -2.382 1.156 0.598
4 C04 C C04 N N N 0 -3.438 -0.955 0.165
5 C05 C C05 N N N 0 -1.054 -0.832 0.403
6 C06 C C06 S N N 0 0.198 -0.043 0.012
7 O07 O O07 N N N 0 0.211 1.204 0.71
8 C08 C C08 N N N 0 1.445 -0.848 0.384
9 C09 C C09 N N N 0 2.673 -0.128 -0.111
10 O10 O O10 N N N 0 2.562 0.921 -0.699
11 O11 O O11 N N N 0 3.89 -0.653 0.103
12 H01 H H01 N N N 0 -1.232 0.706 -1.729
13 H01A H H01A N N N 0 -2.015 -0.86 -2.051
14 H01B H H01B N N N 0 -3.001 0.615 -1.906
15 H03 H H03 N N N 0 -3.352 1.595 0.361
16 H03A H H03A N N N 0 -2.307 1.001 1.674
17 H03B H H03B N N N 0 -1.589 1.828 0.272
18 H04 H H04 N N N 0 -3.337 -1.911 -0.348
19 H04A H H04A N N N 0 -3.536 -1.126 1.237
20 H04B H H04B N N N 0 -4.323 -0.437 -0.203
21 H05 H H05 N N N 0 -1.106 -0.916 1.488
22 H05A H H05A N N N 0 -1.007 -1.828 -0.037
23 H06 H H06 N N N 0 0.191 0.141 -1.062
24 HO07 H HO07 N N N 0 0.218 1.117 1.673
25 H08 H H08 N N N 0 1.498 -0.956 1.467
26 H08A H H08A N N N 0 1.391 -1.834 -0.078
27 HO11 H HO11 N N N 0 4.648 -0.155 -0.232