Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : DCF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C10 N Y N 0 -0.284 0.108 -1.387
2 C1S C C1S R N N 0 -0.494 0.404 1.131
3 C2 C C2 N Y N 0 1.419 -0.589 -0.17
4 C2S C C2S N N N 0 -1.341 -0.759 1.68
5 C3S C C3S S N N 0 -0.791 -0.989 3.111
6 C4S C C4S R N N 0 -0.1 0.364 3.413
7 C5 C C5 N N N 0 -2.026 0.868 -2.814
8 C5S C C5S N N N 0 0.997 0.186 4.463
9 C7 C C7 N N N 0 -0.108 0.584 -4.353
10 C8 C C8 R N N 0 0.658 -0.544 -3.692
11 C9 C C9 N Y N 0 0.67 -0.409 -2.195
12 H1S H H1S N N N 0 -1.133 1.262 0.923
13 H2 H H2 N N N 0 2.061 -0.818 0.667
14 H2S1 H 1H2S N N N 0 -2.393 -0.48 1.719
15 H2S2 H 2H2S N N N 0 -1.204 -1.651 1.069
16 H3S H H3S N N N 0 -0.066 -1.804 3.123
17 H4S H H4S N N N 0 -0.83 1.102 3.744
18 H5 H H5 N N N 0 -2.988 1.359 -2.812
19 H5S1 H 1H5S N N N 0 1.724 -0.544 4.109
20 H5S2 H 2H5S N N N 0 0.555 -0.162 5.396
21 H71 H 1H7 N N N 0 0.302 1.537 -4.019
22 H72 H 2H7 N N N 0 0.0040 0.507 -5.434
23 H8 H H8 N N N 0 0.193 -1.493 -3.959
24 HN6 H HN6 N N N 0 -2.135 0.237 -4.704
25 HO3 H HO3 N N N 0 -2.297 -2.048 3.732
26 HO5 H HO5 N N N 0 2.334 1.282 5.352
27 HO8 H HO8 N N N 0 1.959 -0.622 -5.134
28 N1 N N1 N Y N 0 1.693 -0.821 -1.421
29 N3 N N3 N Y N 0 0.195 -0.01 -0.092
30 N4 N N4 N N N 0 -1.483 0.664 -1.679
31 N6 N N6 N N N 0 -1.517 0.532 -4.017
32 O3S O O3S N N N 0 -1.854 -1.242 4.031
33 O4S O O4S N N N 0 0.468 0.747 2.142
34 O5S O O5S N N N 0 1.651 1.438 4.685
35 O8 O O8 N N N 0 2.004 -0.534 -4.172