Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : CLM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.624 -0.247 2.332
2 CL1 CL CL1A N N N 0 2.877 0.814 3.075
3 CL2 CL CL1B N N N 0 1.081 -1.471 3.54
4 C2 C C2 N N N 0 0.447 0.589 1.901
5 O2 O O2 N N N 0 0.458 1.788 2.08
6 N2 N N2 N N N 0 -0.617 0.0050 1.316
7 C3 C C3 R N N 0 -1.76 0.818 0.897
8 C4 C C4 N N N 0 -2.766 0.914 2.046
9 O4 O O4 N N N 0 -3.217 -0.396 2.395
10 C5 C C5 R N N 0 -2.431 0.17 -0.314
11 O5 O O5 N N N 0 -2.881 -1.14 0.034
12 C6 C C6 N Y N 0 -1.44 0.076 -1.446
13 C7 C C7 N Y N 0 -0.645 -1.051 -1.572
14 C8 C C8 N Y N 0 0.263 -1.147 -2.602
15 C9 C C9 N Y N 0 0.382 -0.096 -3.527
16 N9 N N9 N N N 1 1.267 -0.18 -4.537
17 O9A O O9A N N N -1 1.366 0.732 -5.336
18 O9B O O9B N N N 0 1.968 -1.169 -4.651
19 C10 C C10 N Y N 0 -0.429 1.042 -3.39
20 C11 C C11 N Y N 0 -1.335 1.115 -2.356
21 H1 H H1 N N N 0 2.046 -0.755 1.465
22 HN2 H HN2 N N N 0 -0.625 -0.954 1.173
23 H3 H H3 N N N 0 -1.417 1.818 0.631
24 H41 H 1H4 N N N 0 -3.618 1.519 1.734
25 H42 H 2H4 N N N 0 -2.289 1.376 2.91
26 HO4 H HO4 N N N 0 -3.847 -0.291 3.121
27 H5 H H5 N N N 0 -3.282 0.775 -0.626
28 HO5 H HO5 N N N 0 -2.099 -1.642 0.303
29 H7 H H7 N N N 0 -0.737 -1.857 -0.859
30 H8 H H8 N N N 0 0.882 -2.027 -2.698
31 H10 H H10 N N N 0 -0.345 1.855 -4.096
32 H11 H H11 N N N 0 -1.959 1.99 -2.249