Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : CLK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.234 -0.295 2.224
2 CL1A CL CL1A N N N 0 2.279 0.736 3.269
3 CL1B CL CL1B N N N 0 0.339 -1.477 3.25
4 C2 C C2 N N N 0 0.25 0.573 1.484
5 O2 O O2 N N N 0 0.258 1.774 1.649
6 N2 N N2 N N N 0 -0.637 0.014 0.638
7 C3 C C3 R N N 0 -1.594 0.859 -0.081
8 C4 C C4 N N N 0 -2.868 1.01 0.75
9 O4 O O4 N N N 0 -3.445 -0.277 0.975
10 C5 C C5 R N N 0 -1.935 0.211 -1.425
11 O5 O O5 N N N 0 -2.512 -1.076 -1.199
12 C6 C C6 N Y N 0 -0.68 0.062 -2.245
13 C7 C C7 N Y N 0 -0.288 1.079 -3.097
14 C8 C C8 N Y N 0 0.862 0.946 -3.849
15 C9 C C9 N Y N 0 1.625 -0.209 -3.75
16 N9 N N9 N N N 0 2.789 -0.347 -4.51
17 C10 C C10 N Y N 0 1.226 -1.231 -2.897
18 C11 C C11 N Y N 0 0.077 -1.089 -2.143
19 H1 H H1 N N N 0 1.855 -0.833 1.508
20 H2 H H2 N N N 0 -0.643 -0.946 0.505
21 H3 H H3 N N N 0 -1.153 1.841 -0.253
22 H4C1 H 1H4C N N N 0 -2.625 1.471 1.707
23 H4C2 H 2H4C N N N 0 -3.58 1.638 0.214
24 H4 H H4 N N N 0 -4.244 -0.137 1.502
25 H5 H H5 N N N 0 -2.647 0.839 -1.96
26 HA H HA N N N 0 -1.852 -1.599 -0.724
27 H7 H H7 N N N 0 -0.882 1.977 -3.173
28 H8 H H8 N N N 0 1.167 1.74 -4.514
29 H9N1 H 1H9N N N N 0 3.321 -1.155 -4.44
30 H9N2 H 2H9N N N N 0 3.063 0.362 -5.111
31 H10 H H10 N N N 0 1.817 -2.131 -2.818
32 H11 H H11 N N N 0 -0.231 -1.881 -1.477