Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : CDQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 4.442 -1.012 -0.484
2 C2 C C2 N Y N 0 3.365 -1.123 -1.346
3 C3 C C3 N Y N 0 2.247 -0.334 -1.17
4 C4 C C4 N Y N 0 2.195 0.582 -0.12
5 C5 C C5 N Y N 0 3.282 0.683 0.738
6 C6 C C6 N Y N 0 4.397 -0.105 0.561
7 C7 C C7 N N N 0 2.924 1.744 1.754
8 C8 C C8 N N N 0 1.537 2.193 1.344
9 O9 O O9 N N N 0 0.863 3.04 1.891
10 N10 N N10 N N N 0 1.194 1.477 0.26
11 C11 C C11 N N N 0 -0.085 1.618 -0.441
12 C12 C C12 N Y N 0 -1.061 0.595 0.082
13 C13 C C13 N Y N 0 -0.717 -0.202 1.151
14 C14 C C14 N Y N 0 -1.608 -1.145 1.636
15 C15 C C15 N Y N 0 -2.855 -1.298 1.05
16 C16 C C16 N Y N 0 -3.217 -0.499 -0.028
17 C17 C C17 N Y N 0 -2.318 0.459 -0.515
18 C18 C C18 N N N 0 -2.692 1.314 -1.656
19 O19 O O19 N N N 0 -3.212 2.538 -1.438
20 O20 O O20 N N N 0 -2.533 0.915 -2.793
21 O21 O O21 N N N 0 -4.437 -0.627 -0.611
22 C22 C C22 N N N 0 -5.156 -1.835 -0.341
23 C23 C C23 N N N 0 -5.088 -2.107 1.168
24 O24 O O24 N N N 0 -3.711 -2.236 1.539
25 CL25 CL CL25 N N N 0 5.842 -2.014 -0.707
26 H2 H H2 N N N 0 3.399 -1.831 -2.161
27 H3 H H3 N N N 0 1.411 -0.425 -1.847
28 H6 H H6 N N N 0 5.235 -0.015 1.237
29 H7 H H7 N N N 0 2.907 1.321 2.758
30 H7A H H7A N N N 0 3.626 2.576 1.7
31 H11 H H11 N N N 0 -0.483 2.619 -0.272
32 H11A H H11A N N N 0 0.067 1.463 -1.509
33 H13 H H13 N N N 0 0.253 -0.091 1.613
34 H14 H H14 N N N 0 -1.329 -1.765 2.475
35 HO19 H HO19 N N N 0 -3.373 3.091 -2.215
36 H22 H H22 N N N 0 -6.196 -1.72 -0.647
37 H22A H H22A N N N 0 -4.702 -2.663 -0.885
38 H23 H H23 N N N 0 -5.538 -1.276 1.712
39 H23A H H23A N N N 0 -5.62 -3.029 1.4