Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : C30

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 118


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 -14.73 -3.727 1.098
2 C02 C C2 N N N 0 -14.872 -4.472 -0.204
3 C03 C C3 N N N 0 -15.895 -5.571 -0.336
4 C04 C C4 N N N 0 -14.106 -4.165 -1.221
5 C05 C C5 N N N 0 -13.0 -3.156 -1.054
6 C06 C C6 N N N 0 -11.656 -3.814 -1.374
7 C07 C C7 N N N 0 -10.55 -2.805 -1.207
8 C08 C C8 N N N 0 -10.2 -1.875 -2.34
9 C09 C C9 N N N 0 -9.892 -2.736 -0.076
10 C10 C C10 N N N 0 -8.872 -1.646 0.137
11 C11 C C11 N N N 0 -9.28 -0.795 1.342
12 C12 C C12 N N N 0 -8.261 0.294 1.555
13 C13 C C13 N N N 0 -7.016 0.014 2.357
14 C14 C C14 N N N 0 -8.457 1.484 1.043
15 C15 C C15 N N N 0 -7.387 2.539 1.157
16 C16 C C16 N N N 0 -6.948 2.973 -0.243
17 C17 C C17 N N N 0 -5.878 4.028 -0.129
18 C18 C C18 N N N 0 -6.262 5.476 0.043
19 C19 C C19 N N N 0 -4.614 3.687 -0.179
20 C20 C C20 N N N 0 -3.544 4.724 0.048
21 C21 C C21 N N N 0 -2.653 4.29 1.213
22 C22 C C22 N N N 0 -1.583 5.327 1.441
23 C23 C C23 N N N 0 -1.865 6.521 2.316
24 C24 C C24 N N N 0 -0.408 5.19 0.878
25 C25 C C25 N N N 0 -0.172 4.078 -0.112
26 C26 C C26 N N N 0 0.385 4.663 -1.412
27 C27 C C27 N N N 0 0.621 3.551 -2.401
28 C28 C C28 N N N 0 -0.505 3.074 -3.282
29 C29 C C29 N N N 0 1.805 2.999 -2.495
30 C30 C C30 N N N 0 2.896 3.385 -1.529
31 C40 C C31 R N N 0 8.187 -2.064 0.492
32 C42 C C32 R N N 0 6.888 -3.747 1.602
33 C43 C C33 N N N 0 6.751 -4.493 2.931
34 C45 C C34 S N N 0 7.14 -4.753 0.475
35 C47 C C35 R N N 0 7.336 -3.994 -0.841
36 C49 C C36 R N N 0 8.491 -3.002 -0.679
37 C51 C C37 N N N 0 9.829 -1.663 -2.213
38 C52 C C38 N N N 0 9.982 -0.857 -3.477
39 H011 H H3 N N N 0 -13.748 -3.929 1.527
40 H012 H H2 N N N 0 -15.503 -4.056 1.792
41 H013 H H1 N N N 0 -14.835 -2.657 0.918
42 H031 H H6 N N N 0 -16.046 -6.045 0.634
43 H032 H H5 N N N 0 -15.542 -6.312 -1.052
44 H033 H H4 N N N 0 -16.838 -5.149 -0.684
45 H041 H H7 N N N 0 -14.268 -4.635 -2.18
46 H051 H H8 N N N 0 -13.165 -2.319 -1.733
47 H052 H H9 N N N 0 -12.991 -2.793 -0.026
48 H061 H H10 N N N 0 -11.491 -4.651 -0.695
49 H062 H H11 N N N 0 -11.665 -4.177 -2.402
50 H081 H H12 N N N 0 -10.787 -2.138 -3.22
51 H082 H H14 N N N 0 -9.139 -1.966 -2.57
52 H083 H H13 N N N 0 -10.422 -0.848 -2.049
53 H091 H H15 N N N 0 -10.08 -3.459 0.703
54 H1 H H61 N N N 0 3.574 2.25 1.785
55 H101 H H16 N N N 0 -7.896 -2.094 0.322
56 H102 H H17 N N N 0 -8.821 -1.018 -0.751
57 H111 H H18 N N N 0 -10.256 -0.348 1.157
58 H112 H H19 N N N 0 -9.331 -1.424 2.23
59 H131 H H22 N N N 0 -7.007 0.645 3.246
60 H132 H H21 N N N 0 -6.136 0.231 1.75
61 H133 H H20 N N N 0 -7.003 -1.034 2.654
62 H141 H H23 N N N 0 -9.386 1.709 0.54
63 H151 H H25 N N N 0 -6.531 2.132 1.696
64 H152 H H24 N N N 0 -7.781 3.399 1.698
65 H161 H H27 N N N 0 -7.804 3.38 -0.782
66 H162 H H26 N N N 0 -6.554 2.113 -0.784
67 H181 H H29 N N N 0 -5.803 5.868 0.95
68 H182 H H30 N N N 0 -5.913 6.048 -0.817
69 H183 H H28 N N N 0 -7.346 5.557 0.118
70 H191 H H31 N N N 0 -4.339 2.663 -0.384
71 H2 H H62 N N N 0 5.903 -0.435 2.698
72 H201 H H33 N N N 0 -4.01 5.681 0.283
73 H202 H H32 N N N 0 -2.94 4.826 -0.853
74 H211 H H34 N N N 0 -3.257 4.188 2.115
75 H212 H H35 N N N 0 -2.187 3.333 0.978
76 H231 H H36 N N N 0 -1.601 6.286 3.347
77 H232 H H38 N N N 0 -2.925 6.77 2.26
78 H233 H H37 N N N 0 -1.273 7.37 1.974
79 H241 H H39 N N N 0 0.391 5.874 1.122
80 H251 H H41 N N N 0 -1.113 3.568 -0.316
81 H252 H H40 N N N 0 0.544 3.369 0.303
82 H261 H H42 N N N 0 -0.331 5.372 -1.827
83 H262 H H43 N N N 0 1.326 5.173 -1.207
84 H281 H H45 N N N 0 -0.364 2.018 -3.513
85 H282 H H44 N N N 0 -0.511 3.65 -4.208
86 H283 H H46 N N N 0 -1.454 3.209 -2.764
87 H291 H H47 N N N 0 2.0 2.267 -3.265
88 H301 H H48 N N N 0 3.607 4.042 -2.028
89 H302 H H49 N N N 0 2.458 3.903 -0.676
90 H401 H H50 N N N 0 9.025 -1.383 0.64
91 H421 H H51 N N N 0 5.97 -3.195 1.398
92 H431 H H52 N N N 0 5.972 -5.251 2.843
93 H432 H H53 N N N 0 7.698 -4.972 3.178
94 H441 H H63 N N N 0 6.297 -3.972 4.834
95 H451 H H54 N N N 0 8.035 -5.333 0.698
96 H461 H H64 N N N 0 5.835 -6.143 1.158
97 H471 H H55 N N N 0 6.423 -3.454 -1.09
98 H481 H H65 N N N 0 6.955 -5.583 -2.038
99 H491 H H56 N N N 0 9.414 -3.546 -0.479
100 H501 H H60 N N N 0 7.882 -2.1 -2.502
101 H521 H H59 N N N 0 10.743 -1.314 -4.109
102 H522 H H57 N N N 0 9.032 -0.835 -4.011
103 H523 H H58 N N N 0 10.281 0.161 -3.225
104 N50 N N1 N N N 0 8.64 -2.218 -1.908
105 O31 O O1 N N N 0 3.57 2.208 -1.077
106 O33 O O2 N N N 0 4.27 2.791 1.389
107 O34 O O3 N N N 0 5.852 3.145 -0.545
108 O35 O O4 N N N 0 5.391 0.762 0.149
109 O37 O O5 N N N 0 7.887 1.046 0.397
110 O38 O O6 N N N 0 6.627 0.12 2.378
111 O39 O O7 N N N 0 7.006 -1.312 0.206
112 O41 O O8 N N N 0 7.985 -2.835 1.679
113 O44 O O9 N N N 0 6.401 -3.568 3.962
114 O46 O O10 N N N 0 6.018 -5.63 0.359
115 O48 O O11 N N N 0 7.642 -4.921 -1.885
116 O53 O O12 N N N 0 10.776 -1.811 -1.47
117 P32 P P1 N N N 0 4.794 2.247 -0.032
118 P36 P P2 N N N 0 6.753 0.173 0.774