Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : C2F

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 58


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 2.193 -0.89 5.344
2 C2 C C2 N Y N 0 2.696 0.29 5.636
3 NA2 N NA2 N N N 0 4.036 0.397 5.911
4 N3 N N3 N Y N 0 1.921 1.408 5.666
5 C4 C C4 N Y N 0 0.599 1.326 5.401
6 O4 O O4 N N N 0 -0.106 2.323 5.427
7 C4A C C4A N Y N 0 0.057 0.073 5.095
8 N5 N N5 N N N 0 -1.32 -0.072 4.821
9 C6 C C6 S N N 0 -1.778 -1.309 4.168
10 C7 C C7 N N N 0 -1.08 -2.494 4.852
11 N8 N N8 N N N 0 0.372 -2.285 4.77
12 C8A C C8A N Y N 0 0.891 -1.037 5.075
13 C9 C C9 N N N 0 -1.41 -1.277 2.684
14 N10 N N10 N N N 0 -2.053 -0.125 2.046
15 C11 C C11 N N N 0 -2.27 0.985 5.173
16 C12 C C12 N Y N 0 -1.486 0.588 -2.014
17 C13 C C13 N Y N 0 -2.289 1.447 -1.257
18 C14 C C14 N Y N 0 -2.475 1.208 0.085
19 C15 C C15 N Y N 0 -1.863 0.113 0.689
20 C16 C C16 N Y N 0 -1.058 -0.74 -0.06
21 C17 C C17 N Y N 0 -0.874 -0.509 -1.404
22 C C C N N N 0 -1.286 0.841 -3.453
23 O O O N N N 0 -1.819 1.797 -3.983
24 N N N N N N 0 -0.511 0.013 -4.181
25 CA C CA S N N 0 -0.312 0.264 -5.611
26 CB C CB N N N 0 1.064 -0.252 -6.033
27 CG C CG N N N 0 2.148 0.472 -5.232
28 CD C CD N N N 0 3.504 -0.036 -5.647
29 OE1 O OE1 N N N 0 3.594 -0.891 -6.497
30 OE2 O OE2 N N N 0 4.612 0.459 -5.074
31 CT C CT N N N 0 -1.38 -0.448 -6.4
32 O1 O O1 N N N 0 -1.756 0.0040 -7.454
33 O2 O O2 N N N 0 -1.912 -1.588 -5.931
34 HN21 H 1HN2 N N N 0 4.599 -0.392 5.893
35 HN22 H 2HN2 N N N 0 4.42 1.261 6.124
36 HN3 H HN3 N N N 0 2.319 2.267 5.879
37 H6 H H6 N N N 0 -2.859 -1.405 4.278
38 H71 H 1H7 N N N 0 -1.385 -2.547 5.897
39 H72 H 2H7 N N N 0 -1.347 -3.42 4.343
40 HN8 H HN8 N N N 0 0.959 -3.011 4.507
41 H91 H 1H9 N N N 0 -0.328 -1.193 2.579
42 H92 H 2H9 N N N 0 -1.751 -2.195 2.205
43 HN1 H HN1 N N N 0 -2.61 0.47 2.57
44 H111 H 1H11 N N N 0 -2.056 1.877 4.585
45 H112 H 2H11 N N N 0 -3.285 0.646 4.963
46 H113 H 3H11 N N N 0 -2.178 1.219 6.234
47 H13 H H13 N N N 0 -2.764 2.296 -1.725
48 H14 H H14 N N N 0 -3.095 1.87 0.67
49 H16 H H16 N N N 0 -0.585 -1.588 0.411
50 H17 H H17 N N N 0 -0.253 -1.174 -1.986
51 HN H HN N N N 0 -0.085 -0.749 -3.759
52 HA H HA N N N 0 -0.373 1.335 -5.804
53 HB1 H 1HB N N N 0 1.125 -1.323 -5.84
54 HB2 H 2HB N N N 0 1.212 -0.065 -7.096
55 HG1 H 1HG N N N 0 2.087 1.543 -5.425
56 HG2 H 2HG N N N 0 2.0 0.285 -4.168
57 HOE2 H 2HOE N N N 0 5.482 0.132 -5.34
58 HO2 H HO2 N N N 0 -2.597 -2.046 -6.437