Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Atoms of Molecule

 Molecule : BHS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 -1.074 0.384 -2.321
2 C2 C C2 N Y N 0 -0.026 0.509 -3.106
3 N2 N N2 N N N 0 -0.177 1.098 -4.336
4 N3 N N3 N Y N 0 1.204 0.068 -2.729
5 C4 C C4 N Y N 0 1.375 -0.515 -1.523
6 O4 O O4 N N N 0 2.475 -0.917 -1.173
7 C4A C C4A N Y N 0 0.265 -0.651 -0.683
8 C8A C C8A N Y N 0 -0.967 -0.183 -1.114
9 N5 N N5 N N N 0 0.389 -1.256 0.587
10 C6 C C6 R N N 0 -0.694 -1.062 1.564
11 C7 C C7 N N N 0 -2.032 -1.247 0.834
12 N8 N N8 N N N 0 -2.078 -0.305 -0.293
13 C1' C C1' S N N 0 -0.615 0.348 2.15
14 O1' O O1' N N N 0 -0.731 1.308 1.098
15 C2' C C2' R N N 0 0.726 0.531 2.862
16 O2' O O2' N N N 0 0.842 -0.429 3.914
17 C3' C C3' N N N 0 0.805 1.942 3.448
18 HN21 H 1HN2 N N N 0 -1.049 1.416 -4.617
19 HN22 H 2HN2 N N N 0 0.587 1.196 -4.924
20 HN3 H HN3 N N N 0 1.961 0.174 -3.327
21 HN5 H HN5 N N N 0 1.17 -1.787 0.81
22 H6 H H6 N N N 0 -0.605 -1.799 2.363
23 H71 H 1H7 N N N 0 -2.109 -2.269 0.462
24 H72 H 2H7 N N N 0 -2.855 -1.041 1.518
25 HN8 H HN8 N N N 0 -2.874 0.222 -0.461
26 H1' H H1' N N N 0 -1.427 0.49 2.864
27 HO1 H HO1 N N N 0 0.003 1.147 0.491
28 H2' H H2' N N N 0 1.538 0.388 2.148
29 HO2 H HO2 N N N 0 0.107 -0.268 4.521
30 H3'1 H 1H3' N N N 0 1.761 2.072 3.955
31 H3'2 H 2H3' N N N 0 0.716 2.674 2.645
32 H3'3 H 3H3' N N N 0 -0.006 2.084 4.161