Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AHD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 N N N 0 2.296 -0.478 -0.227
2 C3 C C3 N N N 0 3.429 -1.271 0.428
3 C7 C C7 N N N 0 0.949 -1.04 0.232
4 C8 C C8 N N N 0 -0.184 -0.247 -0.422
5 O12 O O12 N N N -1 -1.95 -2.383 -0.404
6 P9 P P9 N N N 0 -1.789 -0.917 0.124
7 O10 O O10 N N N -1 -2.947 -0.027 -0.443
8 O11 O O11 N N N 0 -1.849 -0.917 1.69
9 P14 P P14 N N N 0 -0.059 1.505 0.065
10 O15 O O15 N N N -1 -0.171 1.624 1.623
11 O16 O O16 N N N -1 -1.219 2.317 -0.605
12 O17 O O17 N N N 0 1.32 2.081 -0.405
13 O13 O O13 N N N 0 -0.082 -0.355 -1.844
14 N4 N N4 N N N 0 4.723 -0.731 -0.013
15 H21 H 1H2 N N N 0 2.371 0.57 0.064
16 H22 H 2H2 N N N 0 2.374 -0.56 -1.311
17 H31 H 1H3 N N N 0 3.355 -2.318 0.136
18 H32 H 2H3 N N N 0 3.352 -1.188 1.512
19 H71 H 1H7 N N N 0 0.875 -2.088 -0.059
20 H72 H 2H7 N N N 0 0.872 -0.958 1.316
21 H13 H H13 N N N 0 -0.152 -1.295 -2.058
22 HN41 H 1HN4 N N N 0 4.792 0.202 0.365
23 HN42 H 2HN4 N N N 0 5.436 -1.281 0.441