Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9YP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OAE O O1 N N N 0 6.372 -2.297 -1.409
2 PBA P P1 N N N 0 5.412 -2.134 -0.127
3 OAF O O2 N N N 0 5.213 -3.454 0.512
4 OAC O O3 N N N 0 6.092 -1.125 0.928
5 CAL C C1 N N N 0 3.8 -1.466 -0.655
6 CAK C C2 N N N 0 2.847 -1.428 0.54
7 OAS O O4 N N N 0 1.584 -0.904 0.126
8 CAM C C3 N N N 0 0.615 -0.825 1.174
9 CAY C C4 R N N 0 -0.691 -0.254 0.619
10 CAN C C5 N N N 0 -0.465 1.191 0.168
11 OAT O O5 N N N 0 0.451 1.209 -0.928
12 CAO C C6 N N N 0 0.733 2.518 -1.429
13 PBB P P2 N N N 0 1.848 3.383 -0.274
14 OAG O O6 N N N 0 2.165 4.857 -0.838
15 OAH O O7 N N N 0 1.198 3.49 1.051
16 OAD O O8 N N N 0 3.221 2.555 -0.133
17 CAP C C7 N N N 0 -1.765 -0.286 1.708
18 NAZ N N1 N Y N 0 -3.046 0.149 1.144
19 CAW C C8 N Y N 0 -3.948 -0.638 0.483
20 CAJ N N2 N N N 0 -3.988 -1.934 0.151
21 CAU C C9 N N N 0 -5.011 -2.436 -0.504
22 NAA N N3 N N N 0 -5.008 -3.771 -0.823
23 NAR N N4 N N N 0 -6.076 -1.67 -0.875
24 CAV C C10 N N N 0 -6.106 -0.352 -0.574
25 OAB O O9 N N N 0 -7.053 0.342 -0.901
26 CAX C C11 N Y N 0 -5.011 0.201 0.13
27 NAQ N N5 N Y N 0 -4.711 1.442 0.585
28 CAI C C12 N Y N 0 -3.559 1.413 1.188
29 H1 H H1 N N N 0 7.248 -2.649 -1.202
30 H2 H H2 N N N 0 6.252 -0.238 0.576
31 H3 H H3 N N N 0 3.935 -0.457 -1.045
32 H4 H H4 N N N 0 3.381 -2.103 -1.434
33 H5 H H5 N N N 0 2.712 -2.437 0.93
34 H6 H H6 N N N 0 3.266 -0.791 1.319
35 H7 H H7 N N N 0 0.434 -1.822 1.576
36 H8 H H8 N N N 0 0.988 -0.176 1.966
37 H9 H H9 N N N 0 -1.018 -0.853 -0.231
38 H10 H H10 N N N 0 -1.414 1.627 -0.145
39 H11 H H11 N N N 0 -0.054 1.769 0.995
40 H12 H H12 N N N 0 1.211 2.439 -2.405
41 H13 H H13 N N N 0 -0.197 3.078 -1.524
42 H14 H H14 N N N 0 2.754 5.376 -0.273
43 H15 H H15 N N N 0 3.702 2.445 -0.965
44 H16 H H16 N N N 0 -1.863 -1.301 2.092
45 H17 H H17 N N N 0 -1.48 0.384 2.52
46 H18 H H18 N N N 0 -4.258 -4.329 -0.565
47 H19 H H19 N N N 0 -5.756 -4.156 -1.306
48 H20 H H20 N N N 0 -6.815 -2.072 -1.357
49 H21 H H21 N N N 0 -3.076 2.264 1.646