Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5SL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N3 N N1 N N N 0 3.358 -0.326 -0.066
2 C4 C C1 N Y N 0 -5.943 -0.969 -1.074
3 N2 N N2 N Y N 0 -2.948 -0.216 1.902
4 C7 C C2 N Y N 0 -7.379 0.937 0.322
5 C6 C C3 N Y N 0 -6.471 0.133 0.985
6 C9 C C4 N Y N 0 -3.408 -1.036 1.004
7 C13 C C5 N N N 0 1.641 1.32 -0.712
8 C20 C C6 N Y N 0 5.926 2.02 0.749
9 C8 C C7 N N N 0 -4.763 -1.696 1.011
10 N5 N N3 N Y N 0 7.95 -0.624 -0.698
11 C18 C C8 N Y N 0 6.018 -1.661 -0.982
12 C16 C C9 N Y N 0 4.603 0.254 0.069
13 C19 C C10 N Y N 0 7.006 0.225 -0.203
14 C1 C C11 N N N 0 -8.567 1.657 -1.761
15 C2 C C12 N Y N 0 -7.577 0.78 -1.038
16 C3 C C13 N Y N 0 -6.855 -0.169 -1.736
17 C5 C C14 N Y N 0 -5.753 -0.82 0.287
18 N1 N N4 N Y N 0 -2.454 -1.187 0.069
19 C10 C C15 N Y N 0 -1.453 -0.436 0.462
20 O1 O O1 N Y N 0 -1.827 0.14 1.609
21 C11 C C16 S N N 0 -0.134 -0.257 -0.244
22 C12 C C17 N N N 0 0.1 1.236 -0.586
23 C14 C C18 S N N 0 2.164 0.385 0.398
24 C15 C C19 N N N 0 1.035 -0.618 0.695
25 C17 C C20 N Y N 0 5.762 -0.414 -0.371
26 N4 N N5 N Y N 0 7.302 -1.774 -1.168
27 N6 N N6 N Y N 0 7.036 1.433 0.359
28 N7 N N7 N Y N 0 4.738 1.457 0.617
29 H1 H H1 N N N 0 3.273 -1.204 -0.471
30 H2 H H2 N N N 0 -5.381 -1.714 -1.619
31 H3 H H3 N N N 0 -7.94 1.682 0.867
32 H4 H H4 N N N 0 -6.316 0.255 2.047
33 H5 H H5 N N N 0 1.964 0.967 -1.692
34 H6 H H6 N N N 0 1.983 2.341 -0.543
35 H7 H H7 N N N 0 5.988 2.999 1.2
36 H8 H H8 N N N 0 -4.699 -2.662 0.509
37 H9 H H9 N N N 0 -5.091 -1.843 2.04
38 H10 H H10 N N N 0 8.905 -0.46 -0.722
39 H11 H H11 N N N 0 5.274 -2.398 -1.248
40 H12 H H12 N N N 0 -8.062 2.552 -2.123
41 H13 H H13 N N N 0 -8.987 1.11 -2.605
42 H14 H H14 N N N 0 -9.367 1.942 -1.078
43 H15 H H15 N N N 0 -7.003 -0.286 -2.799
44 H16 H H16 N N N 0 -0.099 -0.865 -1.148
45 H17 H H17 N N N 0 -0.257 1.877 0.22
46 H18 H H18 N N N 0 -0.38 1.496 -1.529
47 H19 H H19 N N N 0 2.397 0.962 1.293
48 H20 H H20 N N N 0 0.72 -0.527 1.735
49 H21 H H21 N N N 0 1.375 -1.633 0.495