Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3B8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 1.976 -1.0 -0.16
2 C13 C C13 N Y N 0 -2.68 -1.199 0.018
3 C14 C C14 N Y N 0 -2.837 0.202 0.051
4 C15 C C15 N Y N 0 -1.701 1.008 -0.051
5 C16 C C16 N Y N 0 -0.465 0.38 -0.183
6 C17 C C17 N Y N 0 -0.381 -1.026 -0.219
7 C2 C C2 N Y N 0 2.038 0.401 -0.122
8 C20 C C20 N N N 0 -4.175 0.804 0.189
9 C3 C C3 N Y N 0 3.254 1.052 0.072
10 C4 C C4 N Y N 0 4.406 0.308 0.234
11 C5 C C5 N Y N 0 4.348 -1.079 0.203
12 C6 C C6 N Y N 0 3.149 -1.73 0.0080
13 C8 C C8 N N N 0 0.781 1.165 -0.284
14 F9 F F9 N N N 0 5.59 0.93 0.423
15 H15 H H15 N N N 0 -1.779 2.085 -0.028
16 H3 H H3 N N N 0 3.296 2.131 0.096
17 H5 H H5 N N N 0 5.252 -1.654 0.337
18 H6 H H6 N N N 0 3.119 -2.809 -0.014
19 HN12 H HN12 N N N 0 -5.206 2.537 0.189
20 HN19 H HN19 N N N 0 -4.661 -1.614 0.305
21 HN1A H HN1A N N N 0 -3.553 2.706 -0.059
22 HN1B H HN1B N N N 0 -3.705 -2.967 0.021
23 N12 N N12 N N N 0 -4.325 2.141 0.098
24 N18 N N18 N Y N 0 -1.487 -1.752 -0.113
25 N19 N N19 N N N 0 -3.792 -2.006 0.125
26 O10 O O10 N N N 0 0.775 2.365 -0.489
27 O11 O O11 N N N 0 -5.144 0.095 0.385
28 O7 O O7 N N N 0 0.807 -1.641 -0.362