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PDBeChem : Atoms of Molecule
Molecule : 32O
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 20
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
O5 |
O |
O5' |
N |
N |
N |
0 |
-3.26 |
-0.495 |
-0.282 |
2 |
C5 |
C |
C5' |
N |
N |
N |
0 |
-2.305 |
0.296 |
0.427 |
3 |
C4 |
C |
C4' |
S |
N |
N |
0 |
-0.938 |
0.175 |
-0.25 |
4 |
O4 |
O |
O4' |
N |
N |
N |
0 |
-0.431 |
-1.171 |
-0.12 |
5 |
C3 |
C |
C3' |
R |
N |
N |
0 |
0.101 |
1.059 |
0.474 |
6 |
O3 |
O |
O3' |
N |
N |
N |
0 |
0.272 |
2.298 |
-0.218 |
7 |
C2 |
C |
C2' |
S |
N |
N |
0 |
1.401 |
0.227 |
0.425 |
8 |
O2 |
O |
O2' |
N |
N |
N |
0 |
2.416 |
0.926 |
-0.298 |
9 |
C1 |
C |
C1' |
S |
N |
N |
0 |
0.994 |
-1.062 |
-0.322 |
10 |
O1 |
O |
O1' |
N |
N |
Y |
0 |
1.665 |
-2.194 |
0.237 |
11 |
HO5 |
H |
H1 |
N |
N |
Y |
0 |
-4.151 |
-0.466 |
0.092 |
12 |
H51 |
H |
H2 |
N |
N |
N |
0 |
-2.622 |
1.339 |
0.421 |
13 |
H52 |
H |
H3 |
N |
N |
N |
0 |
-2.234 |
-0.056 |
1.456 |
14 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-1.01 |
0.453 |
-1.301 |
15 |
H3 |
H |
H5 |
N |
N |
N |
0 |
-0.2 |
1.238 |
1.506 |
16 |
HO3 |
H |
H6 |
N |
N |
Y |
0 |
0.957 |
2.868 |
0.159 |
17 |
H2 |
H |
H7 |
N |
N |
N |
0 |
1.743 |
-0.007 |
1.433 |
18 |
HO2 |
H |
H8 |
N |
N |
Y |
0 |
3.255 |
0.449 |
-0.36 |
19 |
H1 |
H |
H9 |
N |
N |
N |
0 |
1.221 |
-0.972 |
-1.385 |
20 |
HO1 |
H |
H10 |
N |
N |
Y |
0 |
1.447 |
-3.032 |
-0.194 |
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