Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 212

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O2 N N N 0 1.409 2.059 0.479
2 C7 C C7 N N N 0 -0.178 -0.254 0.407
3 O3 O O3 N N N 0 -0.132 1.687 -1.619
4 C16 C C16 N N N 0 0.94 -1.047 -0.273
5 C19 C C19 N N N 0 2.297 -0.526 0.203
6 O5 O O5 N N N 0 -1.101 2.278 0.636
7 C22 C C22 N N N 0 3.415 -1.319 -0.477
8 P1 P P1 N N N 0 -0.02 1.511 -0.023
9 O9 O O9 N N N 0 -1.899 -0.713 -1.628
10 P8 P P8 N N N 0 -1.796 -0.874 -0.16
11 O10 O O10 N N N 0 -1.936 -2.433 0.219
12 O12 O O12 N N N 0 -2.972 -0.04 0.556
13 O14 O O14 N N N 0 -0.078 -0.41 1.824
14 N25 N N25 N N N 0 4.718 -0.819 -0.02
15 HO2 H HO2 N N N 0 1.452 2.993 0.232
16 HO3 H HO3 N N N 0 0.589 1.172 -2.008
17 H161 H 1H16 N N N 0 0.864 -0.928 -1.354
18 H162 H 2H16 N N N 0 0.845 -2.102 -0.016
19 H191 H 1H19 N N N 0 2.373 -0.645 1.284
20 H192 H 2H19 N N N 0 2.392 0.529 -0.054
21 H221 H 1H22 N N N 0 3.339 -1.2 -1.558
22 H222 H 2H22 N N N 0 3.32 -2.374 -0.221
23 HO10 H HO10 N N N 0 -1.863 -2.494 1.181
24 HO12 H HO12 N N N 0 -3.808 -0.399 0.229
25 HO14 H HO14 N N N 0 -0.167 -1.355 2.008
26 H251 H 1H25 N N N 0 4.786 -1.042 0.961
27 H252 H 2H25 N N N 0 5.421 -1.368 -0.492