Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1NH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C4 N N N 0 2.007 -0.821 2.242
2 C1 C C1 N N N 0 0.542 -1.169 2.185
3 C3 C C3 N N N 0 -0.164 -1.237 0.856
4 C5 C C5 N N N 0 -0.74 0.138 0.513
5 C7 C C7 N N N 0 -1.447 0.069 -0.815
6 C6 C C6 N N N 0 -2.686 0.481 -0.92
7 C8 C C8 N N N 0 -3.445 0.907 0.31
8 C9 C C9 N N N 0 -3.353 0.528 -2.27
9 O8 O O8 N N N 0 -2.436 0.079 -3.27
10 C11 C C11 N N N 0 -3.123 0.147 -4.521
11 C17 C C17 N Y N 0 -2.207 -0.316 -5.624
12 C18 C C18 N Y N 0 -2.173 -1.653 -5.977
13 C12 C C12 N Y N 0 -1.335 -2.088 -6.989
14 C13 C C13 N Y N 0 -0.526 -1.189 -7.652
15 C14 C C14 N Y N 0 -0.554 0.162 -7.3
16 C16 C C16 N Y N 0 -1.407 0.594 -6.282
17 C15 C C15 N N N 0 0.309 1.131 -8.006
18 O9 O O9 N N N 0 0.025 2.313 -8.003
19 C19 C C19 N Y N 0 1.517 0.663 -8.716
20 C24 C C24 N Y N 0 2.076 1.438 -9.735
21 C23 C C23 N Y N 0 3.205 0.995 -10.393
22 C22 C C22 N Y N 0 3.783 -0.213 -10.046
23 C21 C C21 N Y N 0 3.234 -0.985 -9.037
24 C20 C C20 N Y N 0 2.109 -0.552 -8.367
25 C2 C C2 N N N 0 -0.116 -1.411 3.291
26 C10 C C10 N N N 0 0.557 -1.225 4.626
27 O3 O O3 N N N 0 -0.257 -0.398 5.46
28 P2 P P2 S N N 0 0.518 -0.242 6.862
29 O7 O O7 N N N 0 1.838 0.385 6.628
30 O1 O O1 N N N 0 0.726 -1.694 7.525
31 O2 O O2 N N N 0 -0.347 0.682 7.855
32 P1 P P1 N N N 0 0.483 0.795 9.229
33 O4 O O4 N N N 0 1.803 1.407 8.958
34 O5 O O5 N N N 0 -0.329 1.711 10.274
35 O6 O O6 N N N 0 0.691 -0.674 9.853
36 H41 H 1H4 N N N 0 2.545 -1.601 2.782
37 H42 H 2H4 N N N 0 2.401 -0.742 1.229
38 H43 H 3H4 N N N 0 2.135 0.13 2.757
39 H31 H 1H3 N N N 0 0.542 -1.538 0.083
40 H32 H 2H3 N N N 0 -0.973 -1.965 0.912
41 H51 H 1H5 N N N 0 -1.447 0.439 1.286
42 H52 H 2H5 N N N 0 0.068 0.866 0.457
43 H7 H H7 N N N 0 -0.932 -0.318 -1.681
44 H81 H 1H8 N N N 0 -2.776 0.897 1.171
45 H82 H 2H8 N N N 0 -3.835 1.914 0.165
46 H83 H 3H8 N N N 0 -4.271 0.218 0.484
47 H91 H 1H9 N N N 0 -4.23 -0.117 -2.265
48 H92 H 2H9 N N N 0 -3.657 1.552 -2.49
49 H111 H 1H11 N N N 0 -4.004 -0.494 -4.487
50 H112 H 2H11 N N N 0 -3.43 1.175 -4.712
51 H18 H H18 N N N 0 -2.804 -2.362 -5.461
52 H12 H H12 N N N 0 -1.314 -3.133 -7.26
53 H13 H H13 N N N 0 0.128 -1.529 -8.441
54 H16 H H16 N N N 0 -1.434 1.638 -6.005
55 H24 H H24 N N N 0 1.626 2.381 -10.007
56 H23 H H23 N N N 0 3.638 1.593 -11.181
57 H22 H H22 N N N 0 4.666 -0.555 -10.565
58 H21 H H21 N N N 0 3.69 -1.928 -8.772
59 H20 H H20 N N N 0 1.682 -1.156 -7.58
60 H2 H H2 N N N 0 -1.142 -1.745 3.246
61 H101 H 1H10 N N N 0 0.695 -2.196 5.102
62 H102 H 2H10 N N N 0 1.527 -0.75 4.48
63 HO1 H HO1 N N N 0 -0.155 -2.068 7.66
64 HO5 H HO5 N N N 0 0.201 1.752 11.081
65 HO6 H HO6 N N N 0 -0.19 -1.037 10.014