3l32: Sequences

PDBeMotif: 3l32

		Sequences				3D motifs				Ligand environment				Ligand bonds

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Classification:	viral protein \| release date: Wed, Dec 16, 2009
Title:	structure of the dimerisation domain of the rabies virus phosphoprotein
Authors:	I.IVANOV, M.JAMIN, R.W.H.RUIGROK, T.CREPIN
Method:	X-RAY DIFFRACTION (resolution: 1.50Å)

Ligand bond colours:

covalent

ionic

hydrogen

electrostatic

van-der-waals

plane-atom

plane-plane

undefined

- Click here to show 5Å bonds

Chains A,B sequence:
MNLLFQSYLDNVGVQIVRQMRSGERFLKIWSQTVEEIVSYVTVNF

Residue colours: hydrophilic hydrophobic intermediate

Assembly 1

View the assembly/model: (

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Motif search

chain:

Sequence numbers:

Using:	φ/ψ residues code secondary structures
	coordinates of: Cαs Side-chain

View the fragment:

chain A : PHOSPHOPROTEIN member of: PFAM:PF03012, PRODOM:PD004155, UniProt:Q0GBY3
`sec str:`	`..hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh`
`sequence :`	`..NLLFQSYLDNVGVQIVRQMRSGERFLKIWSQTVEEIVSYVTVNF`
`seq num:`	`..90 100 110 120 130`
`CK2_PHOSPHO_SITE`	`..\|\| \|^* \| \| \| ^*`
`asxmotif`	`..*****\| \| \| \|`
`betaturn`	`.. \| \| **** \|`
`nest`	`.. \| \| ***`
`ststaple`	`.. *****`

chain B : PHOSPHOPROTEIN member of: PFAM:PF03012, PRODOM:PD004155, UniProt:Q0GBY3
`sec str:`	`...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh`
`sequence :`	`..MNLLFQSYLDNVGVQIVRQMRSGERFLKIWSQTVEEIVSYVTVNF`
`seq num:`	`..89 99 109 119 129`
`CK2_PHOSPHO_SITE`	`.. ^* \|\| \|\|\| ^*`
`betaturn`	`.. \|****\|`
`nest`	`.. \| ***`
`schellmannloop`	`.. ******`

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