triangle PDBeMotif: 1y7v  
  coner Sequences coner   coner 3D motifs coner   coner Ligand environment coner   coner Ligand bonds coner
   
coner
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coner
AstexViewer TM
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Enzyme   3.2.1.45
Classification hydrolase    | release date: Fri, Dec 10, 2004
Title x-ray structure of human acid-beta-glucosidase covalently bo conduritol b epoxide
Authors A.H.FUTERMAN, A.R.SAWKAR, I.SILMAN, ISRAEL STRUCTURAL PROTEOMICS CENTE, J.L.SUSSMAN, J.W, L.PREMKUMAR, L.TOKER, S.BOLDIN-ADAMSKY
Method X-RAY DIFFRACTION (resolution: 2.40Å)
PDBe Citation   
Small molecules:    search NAG NAG binding statistics NAG   search INS INS binding statistics INS   search SO4 SO4 binding statistics SO4
Modified residues:  search ASN ASN binding statistics ASN
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chains A,B sequence:
ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKG
FGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPL
IHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGL
LSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPA
KATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDS
PIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFL
ETISPGYSIHTYLWHRQ
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 507A  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..                                                                                                                              ||                                                  |                                                      |           |                                                                  |               *          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504A  ..                                                                              *                                               ||                                                  |                                                *     |           |                              *                            *      |               |          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503A  ..                                                              *               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           *                                                         
JMol viewer RasMol script viewer  SO4 501A  ..                                           **                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 499A  ..                                           ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 498A  ..    *             * **                     ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||        | ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|        | || | |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||        | || | |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||        | || | ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***        | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|         | || |       |  |                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           *****|         ****  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***         | || |       |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                    ******       ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |**** ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

Assembly 2     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain B : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 506B  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 505B  ..          **                                                                                                                  ||                                                  |                                                      |           |                                                                  |                          | |          *  ***                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504B  ..          ||                                                                                                                  ||                                                  |             **                                       |       **  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503B  ..          ||                               **                                                                                 ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 502B  ..   *      ||                               ||*** *                                                                            ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 501B  ..   |      ||                               ||||| |                            *                                               ||                                                  |             ||                                 *     |       ||  |                              *                            *      |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 500B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       *                    |     *|*                         | |          |  |||       *  *           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 499B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 498B  ..   |      ||      * *                      ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhhh.hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||          ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|               |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||               |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||               ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***                     |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|                      ****                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           |****|         |  |  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***                      |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   |   | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                                 ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |   | ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

Assembly 3     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  SO4 505B  ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
JMol viewer RasMol script viewer  INS 507A  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..                                                                                                                              ||                                                  |                                                      |           |                                                                  |               *          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504A  ..                                                                              *                                               ||                                                  |                                                *     |           |                              *                            *      |               |          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503A  ..                                                              **              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           *                                *                        
JMol viewer RasMol script viewer  SO4 501A  ..                                           **                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
JMol viewer RasMol script viewer  NAG 499A  ..                                           ||                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
JMol viewer RasMol script viewer  NAG 498A  ..    *             * **                     ||                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||        | ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|        | || | |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||        | || | |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||        | || | ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***        | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|         | || |       |  |                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           *****|         ****  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***         | || |       |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                    ******       ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |**** ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

chain B : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 506B  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 505B  ..          **                                                                                                                  ||                                                  |                                                      |           |                                                                  |                          | |          *  ***                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504B  ..          ||                                                                                                                  ||                                                  |             **                                       |       **  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503B  ..          ||                               **                                                                                 ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 502B  ..   *      ||                               ||*** *                                                                            ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 501B  ..   |      ||                               ||||| |                            *                                               ||                                                  |             ||                                 *     |       ||  |                              *                            *      |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 500B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       *                    |     *|*                         | |          |  |||       *  *           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 499B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 498B  ..   |      ||      * *                      ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..   |      ||      | |                      ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||      *       *          | |          |  |||       |  |           |              |                                                                                                     
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhhh.hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||          ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|               |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||               |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||               ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***                     |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|                      ****                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           |****|         |  |  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***                      |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   |   | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                                 ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |   | ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

Assembly 4     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  SO4 505B  ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
JMol viewer RasMol script viewer  INS 507A  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..                                                                                                                              ||                                                  |                                                      |           |                                                                  |               *          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504A  ..                                                                              *                                               ||                                                  |                                                *     |           |                              *                            *      |               |          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503A  ..                                                              **              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           *                                                         
JMol viewer RasMol script viewer  SO4 501A  ..                                           **                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 499A  ..                                           ||                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 498A  ..    *             * **                     ||                 ||              |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||        | ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|        | || | |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||        | || | |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||        | || | ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***        | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|         | || |       |  |                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           *****|         ****  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***         | || |       |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                    ******       ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |**** ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

chain B : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 506B  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 505B  ..          **                                                                                                                  ||                                                  |                                                      |           |                                                                  |                          | |          *  ***                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504B  ..          ||                                                                                                                  ||                                                  |             **                                       |       **  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503B  ..          ||                               **                                                                                 ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 502B  ..   *      ||                               ||*** *                                                                            ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 501B  ..   |      ||                               ||||| |                            *                                               ||                                                  |             ||                                 *     |       ||  |                              *                            *      |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 500B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       *                    |     *|*                         | |          |  |||       *  *           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 499B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 498B  ..   |      ||      * *                      ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhhh.hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||          ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|               |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||               |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||               ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***                     |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|                      ****                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           |****|         |  |  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***                      |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   |   | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                                 ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |   | ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

Assembly 5     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  SO4 505B  ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
JMol viewer RasMol script viewer  INS 507A  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..                                                                                                                              ||                                                  |                                                      |           |                                                                  |               *          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504A  ..                                                                              *                                               ||                                                  |                                                *     |           |                              *                            *      |               |          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503A  ..                                                              *               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           *                                                         
JMol viewer RasMol script viewer  SO4 501A  ..                                           **                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 499A  ..                                           ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
JMol viewer RasMol script viewer  NAG 498A  ..    *             * **                     ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                                         
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||        | ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|        | || | |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||        | || | |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||        | || | ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***        | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****         | || |       |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|         | || |       |  |                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           *****|         ****  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***         | || |       |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                    ******       ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |**** ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

chain B : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 506B  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 505B  ..          **                                                                                                                  ||                                                  |                                                      |           |                                                                  |                          | |          *  ***                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504B  ..          ||                                                                                                                  ||                                                  |             **                                       |       **  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503B  ..          ||                               **                                                                                 ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 502B  ..   *      ||                               ||*** *                                                                            ||                                                  |             ||                                       |       ||  |                                                                  |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 501B  ..   |      ||                               ||||| |                            *                                               ||                                                  |             ||                                 *     |       ||  |                              *                            *      |                          | |          |  |||                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 500B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       *                    |     *|*                         | |          |  |||       *  *           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 499B  ..   |      ||                               ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
JMol viewer RasMol script viewer  NAG 498B  ..   |      ||      * *                      ||||| |                            |                                               ||                                                  |             ||                                 |     |       ||  |                              |       |                    |     |||                         | |          |  |||       |  |           |              |                                                                                                     
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee.........eeeeeeeeeeeee..eeeee.hhhhhhhhhh.hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||          ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |  |  |   |  || | |  |     | | | |  | | |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  | | |   |||| |      | |||      ^***||   | ||                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..       ||||       | || |        |  | |  |^**^**|               |    ||  |        |    |     |  |          |  | ||| | |          ^**  | |||  | ||||||  |             |  |              |  | |||   ||^** |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | || | |  |       |  |  |   |  |^** |  |     | | | |  | ^**  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  ^** |   ^**| |      | |||      | ^**|   ^**|                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..       ||||       | ^***        |  | ^*** | ||||               |    ||  |        |    |     |  |          |  | ||| | |               ^***^*** |||||^***             |  |              |  | |||   ||    |  ||  ||           || |||         |  || |  |       |   |      |   ||  | |  |        |  |      | ^*** |  |       |  |  |   ^***    |  |     | | | |  |   |  |   |  |||                    | ||| | |||           | |   |  |  |  ||   |  |   |    | | |      | |||      | ^***   ^***                       
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..       ||||       | ||          |  |      | ||||               ^*****|  |        ^*****     |  |          |  | |^*****               | | |  | |||||                 |  |              |  | |^*****^*****  ||  ||           || |||         |  |^*****       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   ^*****                    | ||| | |||           | |   |  |  |  ||   |  |   ^***** | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..       ||||       | ||          |  |      | ^***                     |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  ||                     | ||| | |||           | |   |  |  |  ||   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||  ||           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   *****                     | ||| | |||           | |   |  |  *****   |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxmotif ..       ||||       | ||          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  *****|           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  | | |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** *****           | |   |  |  |  |    |  |          | |      | |||      | | |                               
search RasMol script viewer Motif-ligand binding stats  asxturn ..       ||||       ***|          |  |      | |||                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  *** |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***|| ***||           | |   |  |  |  |    |  |          ***      | ***      *** |                               
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..       ||||       |  |          |  |      *****                      |  |                   |  |          |  | | | |                 | | |  | |||||                 |  |              |  | | |         |  ||   |           || |||         |  |  |  |       |   |      |   ||  | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | | |  |   |  |   |  |                      ***** | |||           | |   |  |  |  |    |  |          | |      *****      | | |                               
search RasMol script viewer Motif-ligand binding stats  betaturn ..       ||||       |  |          ****      ****|                      ****                   |  |          |  | | | |                 | | |  ****|||                 |  |              |  | | |         ****|   |           |****|         |  |  |  |       |   |      |   |**** ****        |  |      |  |   |  |       ****  |   |       |  |     | | | |  |   ****   ****                      ****| ****|           | |   ****  ****    ****          | |      ****|      | | |                               
search RasMol script viewer Motif-ligand binding stats  nest ..       |***       |  |          |  |        ***                      |  |                   |  |          |  | | ***                 | | |    ****|                 |  |              |  | ***             |   |           |  ***         |  |  |  |       |   |      |   |   | |  |        |  |      |  |   |  |       |  |  |   |       |  |     | | ***  |   |  |                               ***   ***           ***                 |  |          | |        ***      | | |                               
search RasMol script viewer Motif-ligand binding stats  niche ..       | |        ****          ****                                 ****                   ****          **** |                     | ***     ****                 ****              ****                 |   |           |    |         |  *******       |   |      |   |   | ****        ****      ****   ****       ****  |   |       ****     | | ******   ****                                                                       ****          ***                 *****                               
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..       | |                                                                                                   | |                     | |                                                                   |   |           ******         |                |   |      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stmotif ..       | |                                                                                                   | |                     | |                                                                   |   |                          |                *****      |   |   | |                                             |   |                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  ststaple ..       | |                                                                                                   | |                     | |                                                                   *****                          |                           *****   | |                                             *****                | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  stturn ..       ***                                                                                                   ***                     ***                                                                                                  |                                   ***                                                                  | |                                                                                                                                                           
search RasMol script viewer Motif-ligand binding stats  Catalytic site ..                                                                                                                                                                                                                                          *                                                                                                        * *                                                                                                                                                           

Assembly 6     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : GLUCOSYLCERAMIDASE
member of: CATH:search2.60.40.1180/search3.20.20.80GENE3D:searchG3DSA_2.60.40.1180/searchG3DSA_3.20.20.80PANTHER:searchPTHR11069/searchPTHR11069_SF9PFAM:searchPF02055PRINTS:searchGLHYDRLASE30SUPERFAMILY:searchSSF51011/searchSSF51445UniProt:searchP04062
JMol viewer RasMol script viewer  INS 507A  ..                                                                                                                              **                                                  *                                                      *           *                                                                  *                          * *                                      *              *                                                                                                     
JMol viewer RasMol script viewer  SO4 506A  ..                                                                                                                              ||                                                  |                                                      |           |                                                                  |               *          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 504A  ..                                                                              *                                               ||                                                  |                                                *     |           |                              *                            *      |               |          | |                                      |              |                                                                                                     
JMol viewer RasMol script viewer  SO4 503A  ..                                                              *               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           *                                *                        
JMol viewer RasMol script viewer  SO4 501A  ..                                           **                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
JMol viewer RasMol script viewer  NAG 499A  ..                                           ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
JMol viewer RasMol script viewer  NAG 498A  ..    *             * **                     ||                 |               |                                               ||                                                  |                                                |     |           |                              |                            |      |               |          | |                                      |              |                                           |                                |                        
sec str:  .......ee.......eeeee................eeeeeeee......eeeeee..........eeeeeeeeeeee..eeeee.hhhhhhhhh..hhhhhhhhhhhhhh.......eeeeee..........................hhhhhhhhhhhhhhhhhhh....eeeeee...hhhhh................hhhhhhhhhhhhhhhhhhhhh.....eee...hhhhhhh..........hhhhhhhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhhhhhh...eeeeeee.........hhhhhhhhh...eeeeeeee.............hhhhhhhhhhhhhhhhhh.eeeeeeee...................eeeehhh.eeeehhhhhhhhhhhh......eeeeeee.....eeeeeee.....eeeeeee.....eeeeeee...eeeeeee...eeeeeee...
sequence :  ..ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRRMELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSEEGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..       ||||       ^*** |        |  | |  ||||||||        | ^*** |    ||  |        |    |     |  |          |  | ||| | |          | |  | |||  | |||^*** |             |  |              |  | |||   ||| | |  ||  ||           || |||         |  || |  |       |   |      |   || ^***  |        |  |      | || | |  |       |