triangle PDBeMotif: 1sd9  
  coner Sequences coner   coner 3D motifs coner   coner Ligand environment coner   coner Ligand bonds coner
   
coner
   Search  |  PDB header search  |  Upload PDB file  |  Molecule binding  |  Pair bonds  |  Motif binding  |  3D environment  |  Motif inclusion  
coner
AstexViewer TM
Download original PDB file
Download xml file
Enzyme   1.20.4.1
Classification oxidoreductase    | release date: Fri, Feb 13, 2004
Title arsenate reductase c12s mutant +0.4m arsenate from e. coli
Authors B.F.EDWARDS, S.DEMEL
Method X-RAY DIFFRACTION (resolution: 1.65Å)
PDBe Citation   
Small molecules:    search CS CS binding statistics CS   search SO4 SO4 binding statistics SO4
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chain A sequence:
MSNITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQ
LIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDEAGKRLK
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : ARSENATE REDUCTASE
member of: CATH:search3.40.30.10GENE3D:searchG3DSA_3.40.30.10PANTHER:searchPTHR30041/searchPTHR30041_SF0PFAM:searchPF03960PROSITE PROFILES:searchPS51353, SUPERFAMILY:searchSSF52833TIGRFAMS:searchTIGR00014UniProt:searchP08692
JMol viewer RasMol script viewer  CS 402A  ..                                   *    *                                                                                                 
JMol viewer RasMol script viewer  CS 401A  ..                                   |    |                                                                     ** *                        
JMol viewer RasMol script viewer  SO4 203A  ..           *  *                    |    |                                                                **   || |         *              
JMol viewer RasMol script viewer  SO4 202A  ..           |  |                    |    |                                                               *||   || |         |              
JMol viewer RasMol script viewer  SO4 201A  ..         ***  |                    |    |                *                                 *            *||   || |         |              
sec str:  ....eee....hhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhh.hhhhhh...hhhhhhh.......hhhhhhhhhhhhhhhh...eeee..eeee..hhhhhhhh........ee.....eee.......
sequence :  ..NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDEAGKRL
seq num:  ..3         13        23        33        43        53        63        73        83        93        103       113       123       133     
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..^***  |  ||| | |   || ||||  |        |  ||      | |||| |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      || |||     | || 
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..      |  ||^** |   || ||||  |        |  ||      | |^** |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      || |||     | || 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..      |  ||  | |   || ^***  |        ^***|      | | || |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      ^***||     | || 
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..      |  |^*****   || |^*****        |   |      | | || |||  |     |||||   |   |      || ||      | |^***** |  ||  | |       | |||     | || 
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..      |  |   |     || |||            |   |      | | || |||  |     |||||   |   |      || ||      | |       |  ||  | |       | |||     ^*** 
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..      |  |   |     || |||            |   |      | | || |||  |     |||||   |   |      || ||      | |       |  ||  | |       *****     | |  
search RasMol script viewer Motif-ligand binding stats  betaturn ..      |  |   |     *****|            |   |      | | ****||  |     |||||   |   |      *****      | |       ****|  | |       ****|     | |  
search RasMol script viewer Motif-ligand binding stats  nest ..      |  |   |        ***            |   |      ***  |  ||  |     ****|   |   |       |  |      | |           |  | |         ***     ***  
search RasMol script viewer Motif-ligand binding stats  niche ..      ****   |                       |   |           ********      ****   |   |       ****      | |           ******                      
search RasMol script viewer Motif-ligand binding stats  stmotif ..         *****                       *****                                *****                 | |                                       
search RasMol script viewer Motif-ligand binding stats  stturn ..                                                                                                ***                                       

Assembly 2     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : ARSENATE REDUCTASE
member of: CATH:search3.40.30.10GENE3D:searchG3DSA_3.40.30.10PANTHER:searchPTHR30041/searchPTHR30041_SF0PFAM:searchPF03960PROSITE PROFILES:searchPS51353, SUPERFAMILY:searchSSF52833TIGRFAMS:searchTIGR00014UniProt:searchP08692
JMol viewer RasMol script viewer  CS 402A  ..                                   *    *                                                                                                 
JMol viewer RasMol script viewer  CS 401A  ..                                   |    |                                                                     ** *                        
JMol viewer RasMol script viewer  SO4 203A  ..           *  *                    |    |                                                                **   || |         *              
JMol viewer RasMol script viewer  SO4 202A  ..           |  |                    |    |                                                               *||   || |         |              
JMol viewer RasMol script viewer  SO4 201A  ..         ***  |                    |    |                *                                 *            *||   || |         |              
sec str:  ....eee....hhhhhhhhhhhhhh....eee.......hhhhhhhhhhhhh.hhhhhh...hhhhhhh.......hhhhhhhhhhhhhhhh...eeee..eeee..hhhhhhhh........ee.....eee.......
sequence :  ..NITIYHNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTDDQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQDAQKGAFTKEDGEKVVDEAGKRL
seq num:  ..3         13        23        33        43        53        63        73        83        93        103       113       123       133     
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..^***  |  ||| | |   || ||||  |        |  ||      | |||| |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      || |||     | || 
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..      |  ||^** |   || ||||  |        |  ||      | |^** |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      || |||     | || 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..      |  ||  | |   || ^***  |        ^***|      | | || |||  |     |||||   |   |      || ||      | ||    | |  ||  | |      ^***||     | || 
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..      |  |^*****   || |^*****        |   |      | | || |||  |     |||||   |   |      || ||      | |^***** |  ||  | |       | |||     | || 
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..      |  |   |     || |||            |   |      | | || |||  |     |||||   |   |      || ||      | |       |  ||  | |       | |||     ^*** 
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..      |  |   |     || |||            |   |      | | || |||  |     |||||   |   |      || ||      | |       |  ||  | |       *****     | |  
search RasMol script viewer Motif-ligand binding stats  betaturn ..      |  |   |     *****|            |   |      | | ****||  |     |||||   |   |      *****      | |       ****|  | |       ****|     | |  
search RasMol script viewer Motif-ligand binding stats  nest ..      |  |   |        ***            |   |      ***  |  ||  |     ****|   |   |       |  |      | |           |  | |         ***     ***  
search RasMol script viewer Motif-ligand binding stats  niche ..      ****   |                       |   |           ********      ****   |   |       ****      | |           ******                      
search RasMol script viewer Motif-ligand binding stats  stmotif ..         *****                       *****                                *****                 | |                                       
search RasMol script viewer Motif-ligand binding stats  stturn ..                                                                                                ***                                       

   New search    1sd9:  Sequences  |  3D motifs  |  Ligand environment  |   Ligand bonds   |  SPICE view  |  PDB  |  XML