triangle PDBeMotif: 1nwy  
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Classification ribosome    | release date: Fri, Feb 7, 2003
Title complex of the large ribosomal subunit from deinococcus radiodurans with azithromycin
Authors A.YONATH, F.FRANCESCHI, F.SCHLUENZEN, H.A.S.HANSEN, H.BARTELS, J.HARMS, R.ZARIVACH
Method X-RAY DIFFRACTION (resolution: 3.30Å)
PDBe Citation   
Small molecules:    search ZIT ZIT binding statistics ZIT
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chain A sequence:
AVKKYRPYTPSRRQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSRFIGGGHKRLYRIIDFKRRDKSGVNAKVAA
IEYDPNRSARIALLHYADGEKRYILAPEGLTVGATVNAGPEAEPKLGNALPLRFVPVGAVVHALELVPGKGAQLARSAGT
SVQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTG
AGRVPVTPWGKPTKGLKTRRKRKTSDRFIVTRRK
Chain B sequence:
MKGILGTKIGMTQIWKNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNKPMQGHFAKAGVAPTRILRE
FRGFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHM
GMERVTVQNLEVVEIRAGENLILVKGAIPGANGGLVVLRSAAKASAAKGGK
Chain C sequence:
AQINVIGQNGGRTIELPLPEVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGG
VAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAA
RNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEEEAGEEQQ
Chain D sequence:
MQQLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLR
QGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTA
KTDEEARALLQSMGLPFRKQ
Chain E sequence:
MSRIGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLVANAVKGVS
DGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGK
GVRFVGEQIALKAGKAGATGGKGKK
Chain F sequence:
MQVILLEPSRLGKTGEVVSVKDGYARNWLIPQGLAVSATRTNMKTLEAQLRSIEKRQAQEKAVAEDLASRLNGVAVELSV
RAGEGKIYGAVTHQDVANSLDQLGFDVDRRKIDMPKTVKEVGEYDIAYRAHPEVTIPMKLVVHAAK
Chain G sequence:
MKKVAGIVKLQLPAGKATPAPPVGPALGQYGANIMEFTKAFNAQTADKGDAIIPVEITIYADRSFTFITKTPPMSYLIRK
AAGIGKGSSTPNKAKVGKLNWDQVLEIAKTKMPDLNAGSVEAAANTVAGTARSMGVTVEGGPNA
Chain H sequence:
MAFPDTDVSPPRGGPSSPAKSPLLRSFKVKTYIPKNDEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFV
VVINAAQVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSA
QKPQVLKTQPLEVK
Chain I sequence:
MIMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHA
IKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDRRFMKIVSLAPEVL
Chain J sequence:
MKLHDLKPTPGSRKDRKRVGRGPGGTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNNVGTTYEVVKLSQL
QDLEDTTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLPEVQTQQDDAQKAE
Chain K sequence:
MLLPKRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAE
TRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKREVYDEAQ
Chain L sequence:
MRHGKAGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRLVAQDIHDKDVVRKVM
DEVAPKYAERPGGYTRILRVGTRRGDGVTMALIELV
Chain M sequence:
ATATTIRRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALKSGNKTDTAAAVGKALAAAAAE
KGIKQVVFDRGSYKYHGRVKALADAAREGGLDF
Chain N sequence:
MQTHIKINRGELLRGIEQDHTRQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERV
FPFASPLVNQVTIVERGKVRRAKLYYLRELRGKAARIKSDRSRVMKDAARAQQDKANASASQAAAAQADVTVISAAPEVA
PETQGE
Chain O sequence:
MPRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFI
NGLKRANIDLNRKVLADIAAREPEAFKALVDASRNARQ
Chain P sequence:
MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFVGGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQY
RRRTGHRQNFTAIKILGIQG
Chain Q sequence:
MTAPEQTFRNKKQRKQQVKLRKPGFAVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANAL
HNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAEKGNK
Chain R sequence:
SHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVR
LAEGQSIEALAGQA
Chain S sequence:
MPRPSAGSHHNDKLHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASK
VALVDPETGKATRVRKQIVDGKKVRVAVASGKTID
Chain T sequence:
MELTAKPRTPKQKLDESMIAAVAYNKENNVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIH
VDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTL
AADPELTVVSVLPPRLTAEELEAEVQAAQVAGLVAAGELSEEAAEAVLEGDASLEEVKAEASEDNAGTDSEDNSDAQ
Chain U sequence:
MAHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKGKGARFIS
IEAAQTEVAAD
Chain W sequence:
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGEQQ
Chain X sequence:
MKIKLVRSVIGRPGNQVKTVQALGLRKIGDSREVSDTPAVRGMVKTVKHLLEVQE
Chain Y sequence:
MQKDLHPKAVPCKIIYQGQVVMETMSTRPEIHVDVWSGVHPFWTGEERFLDTEGRVDKFNKRFGDSYRRGSKK
Chain Z sequence:
AKHPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQVLAV
Chain 1 sequence:
MAKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKKV
Chain 2 sequence:
MKRTYQPNNRKRAKTHGFRARMKTKSGRNILARRRAKGRHQLTVSDE
Chain 3 sequence:
PKMKTHKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWARMKLMLPRGK
Chain 4 sequence:
MKVRSSVKKMCDNCKVVRRHGRVLVICSNVKHKQRQG
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : RIBOSOMAL PROTEIN L2
member of: GENE3D:searchG3DSA_2.30.30.30/searchG3DSA_2.40.50.140/searchG3DSA_4.10.950.10HAMAP:searchMF_01320_BPANTHER:searchPTHR13691/searchPTHR13691_SF5PFAM:searchPF00181/searchPF03947PIRSF:searchPIRSF002158PROSITE PATTERNS:searchPS00467, SUPERFAMILY:searchSSF50104/searchSSF50249TIGRFAMS:searchTIGR01171UniProt:searchQ9RXJ9
sec str:  ................................................................................................................................................................................................................................................................................
sequence :  ..KKYRPYTPSRRQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSRFIGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEKRYILAPEGLTVGATVNAGPEAEPKLGNALPLRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGRVPVTPWGKPTKGLKTRRKRKTSDRFIVTR
seq num:  ..4         14        24        34        44        54        64        74        84        94        104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..        | |  |  |    | |             |    |   | |                                  ^***|                  |    |                                    |    |                                    |    |               |  ||          |   |    |                   | || ||| |   | 
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..        | |  |  |    | |             |    |   | |                                    | |                  |    |                                    |    |                                    |    |               |  ||          |   |    |                   | |**^*| |   | 
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..        ^**  |  |    ^**             |    |   ^**                                    ^**                  |    |                                    |    |                                    |    |               |  ||          |   |    |                   ^**    ^**   ^*
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..             ^***                    |    |                                                               |    |                                    |    |                                    |    |               |  ||          |   |    |                                  
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..                                     ^*****                                                               ^*****                                    ^*****                                    ^*****               |  ||          |   ^*****                                  
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..                                                                                                                                                                                                                   ^***|          |                                           
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_L2 ..                                                                                                                                                                                                                       ************                                           

chain B : RIBOSOMAL PROTEIN L3
member of: GENE3D:searchG3DSA_2.40.30.10/searchG3DSA_4.10.960.10HAMAP:searchMF_01325_BPANTHER:searchPTHR11229PFAM:searchPF00297PROSITE PATTERNS:searchPS00474, SUPERFAMILY:searchSSF50447TIGRFAMS:searchTIGR03625UniProt:searchQ9RXK2
sec str:  ...............................................................................................................................................................................................................
sequence :  ..MKGILGTKIGMTQIWKNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNKPMQGHFAKAGVAPTRILREFRGFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIRAGENLILVKGAIPGANGGLVVLRSAAKAS
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..  |    |                                                              |    |                   |         |^** |       |    |    | ^**                  |  |                              |    |              
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..  ^*****                                                              ^*****                   |         ^*****       |    ^*****                      |  |                              ^*****              
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..                                                                                               |                      |                                ^***                                                  
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_L3 ..                                                                                               ************************                                                                                      

chain C : RIBOSOMAL PROTEIN L4
member of: GENE3D:searchG3DSA_3.40.1370.10HAMAP:searchMF_01328_BPANTHER:searchPTHR10746/searchPTHR10746_SF6PFAM:searchPF00573SUPERFAMILY:searchSSF52166TIGRFAMS:searchTIGR03953UniProt:searchQ9RXK1
JMol viewer RasMol script viewer  ZIT 28820  ..                                                         *   *                                                                                                                                       
sec str:  .......................................................................................................................................................................................................
sequence :  ..AQINVIGQNGGRTIELPLPEVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEE
seq num:  ..2         12        22        32        42        52        62        72        82        92        102       112       122       132       142       152       162       172       182       192    
search RasMol script viewer Motif-ligand binding stats  ASN_GLYCOSYLATION ..      |    |                       | | || | |       | ||  |    |             |    |                  |    | |  |                           |   |||    |  | | |   ^***                                
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..      |    |                       | **^* | |       | ||  |    |             |    |                  |    | |  |                           |   |||    |  | | |                                       
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..      |    |                       ^** |  ^**       ^**|  |    |             |    |                  |    | |  |                           |   ^**    |  | ^**                                       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..      |    |                           |    |       |  |  |    |             |    |                  |    | ^***                           |    |     ^***                                           
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..      ^*****                           ^*****       |  |  ^*****             ^*****                  ^*****                                ^*****                                                    
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..                                                    ^***                                                                                                                                             

chain D : RIBOSOMAL PROTEIN L5
member of: GENE3D:searchG3DSA_3.30.1440.10HAMAP:searchMF_01333_BPANTHER:searchPTHR11994PFAM:searchPF00281/searchPF00673PIRSF:searchPIRSF002161SUPERFAMILY:searchSSF55282UniProt:searchQ9RXJ0
sec str:  ....................................................................................................................................................................................
sequence :  ..QQLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDEEARALLQSMGLPFRK
seq num:  ..2         12        22        32        42        52        62        72        82        92        102       112       122       132       142       152       162       172     
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..                                     |  ^**|                                    |    |  ^**                       |    |                             |    |  ^**|  |              
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..                                     |  ^***                                    |    |                            |    |                             |    |     ^***              
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..                                     ^*****                                     ^*****                            ^*****                             ^*****                       

chain E : RIBOSOMAL PROTEIN L6
member of: GENE3D:searchG3DSA_3.90.930.12HAMAP:searchMF_01365_BPANTHER:searchPTHR11655/searchPTHR11655_SF14PFAM:searchPF00347PIRSF:searchPIRSF002162PRINTS:searchRIBOSOMALL6SUPERFAMILY:searchSSF56053TIGRFAMS:searchTIGR03654UniProt:searchQ9RSL3
sec str:  ...................................................................................................................................................................................
sequence :  ..GKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGKGVRFVGEQIALKAGKAGATGG
seq num:  ..5         15        25        35        45        55        65        75        85        95        105       115       125       135       145       155       165       175    
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..         |    |                      ^**                     |    |      |    |               ^**                  |    |   |  | |  |    |    |                             |    
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..         |    |                                              |    |      |    |                                    |    |   ^*** ^***    |    |                             |    
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..         ^*****                                              ^*****      ^*****                                    ^*****                ^*****                             ^****
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..                                                                                                                                                                                 

chain F : RIBOSOMAL PROTEIN L9
member of: GENE3D:searchG3DSA_3.10.430.100/searchG3DSA_3.40.5.10HAMAP:searchMF_00503PANTHER:searchPTHR21368PFAM:searchPF01281/searchPF03948PROSITE PATTERNS:searchPS00651, SUPERFAMILY:searchSSF55653/searchSSF55658TIGRFAMS:searchTIGR00158UniProt:searchQ9RY49
sec str:  ......................................................
sequence :  ..MQVILLEPSRLGKTGEVVSVKDGYARNWLIPQGLAVSATRTNMKTLEAQLRS
seq num:  ..1         11        21        31        41          
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..           |      ^**|          |    ||             
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..           |      ^***          |    ||             
search RasMol script viewer Motif-ligand binding stats  TYR_PHOSPHO_SITE ..           |                    |    ||             
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..           |                    ^*****|             
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_L9 ..           ****************************             

chain G : RIBOSOMAL PROTEIN L11
member of: GENE3D:searchG3DSA_1.10.10.250/searchG3DSA_3.30.1550.10HAMAP:searchMF_00736PANTHER:searchPTHR11661PFAM:searchPF00298/searchPF03946PRODOM:searchPD001367PROSITE PATTERNS:searchPS00359, SMART:searchSM00649SUPERFAMILY:searchSSF46906/searchSSF54747TIGRFAMS:searchTIGR01632UniProt:searchQ9RSS7
sec str:  .................................................................................................................................................
sequence :  ..MKKVAGIVKLQLPAGKATPAPPVGPALGQYGANIMEFTKAFNAQTADKGDAIIPVEITIYADRSFTFITKTPPMSYLIRKAAGIGKGSSTPNKAKVGKLNWDQVLEIAKTKMPDLNAGSVEAAANTVAGTARSMGVTVEGGPN
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131          
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..                           |    |                                                 |    |                             |    | |   |^** |     |   
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..                           ^*****                                                 ^*****                             ^***** |   ^*****     |   
search RasMol script viewer Motif-ligand binding stats  RIBOSOMAL_L11 ..                                                                                                                            ****************   

chain 0 : 23S RIBOSOMAL RRNA
JMol viewer RasMol script viewer  ZIT 28820  ..                                                                                                                                                                                                                                                        ..ZIT ..                                                                                  ..                                                                                                                                                                                                                                                                                                                                                                                         *                                      *                                                                                        ..ZIT ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ..ZIT ..        ..         ..         ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ..ZIT ..                                                                                                    
JMol viewer RasMol script viewer  ZIT 28810  ..                                                                                                                                                                                                                                                        ..ZIT ..                                                                                  ..                                                                                                                                                                                                                                                                                                                                                                                         |                                      |                                                                                        ..ZIT ..                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          **  *                                                    ..ZIT ..        ..         ..         ..                                                                                                                                                                                                                                                                                                                                     * *                                                                                *                      **                                                                                                                                                                                         ..ZIT ..                                                                                                    
sec str:  ............................................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................
sequence :  ..GGUCAAGAUAGUAAGGGUCCACGGUGGAUGCCCUGGCGCUGGAGCCGAUGAAGGACGCGAUUACCUGCGAAAAGCCCCGACGAGCUGGAGAUACGCUUUGACUCGGGGAUGUCCGAAUGGGGAAACCCACCUCGUAAGAGGUAUCCGCAAGGAUGGGAACUCAGGGAACUGAAACAUCUCAGUACCUGAAGGAGAAGAAAGAGAAUUCGAUUCCGUUAGUAGCGGCGAGCGAACCCGGAUCAGCCCAA... ..AUUCAACCCCUCAAGCCGAAGUGGCUGGAAAGCUACACCUCAGAAGGUGAGAGUCCUGUAGGCGAACGAGCGGUUGACUGUA..AGGUCGUUGUUCGUGAAACGAUGACUGAAUCCGCGCGGACCACCGCGCAAGGCUAAAUACUCCCAGUGACCGAUAGCGCAUAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGGGAGGGGAGUGAAAGAGAACCUGAAACCGUGGACUUACAAGCAGUCAUGGCACCUUAUGCGUGUUAUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUUAGACCUGACGUGCGAGCUUAAGUUGAAAAACGGAGGCGGAGCGAAAGCGAGUCCGAAUAGGGCGGCAUUAGUACGUCGGGCUAGACUCGAAACCAGGUGAGCUAAGCAUGACCAGGUUGAAACCCCCGUGACAGGGGGCGGAGGACCGAACCGGUGCCUGCUGAAACAGUCUCGGAUGAGUUGUGUUUAGGAGUGAAAAGCUAACCGAACCUGGAGAUAGCUAGUUCUCCCCGAAAUGUAUUGAGGUACAGCCUCGGAUGUUGACCAUGUCCUGUAGAGCACUCACAAGGCUA... ..AAACCUUAUGAAACUCCGAAGGGGCACGCGUUUAGUCCGGGAGUGAGGCUGCGAGAGCUAACUUCCGUAGCCGAGAGGGAAACAACCCAGACCAUCAGCUAAGGUCCCUAAAUGAUCGCUCAGUGGUUAAGGAUGUGUCGUCGCAUAGACAGCCAGGAGGUUGGCUUAGAAGCAGCCACCCUUCAAAGAGUGCGUAAUAGCUCACUGGUCGAGUGACGAUGCGCCGAAAAUGAUCGGGGCUCAAGUGAUCUACCGAAGCUAUGGAUUCAACUCGCGAAGCGAGUUGUCUGGUAGGGGAGCGUUCAGUCCGCGGAGAAGCCAUACCGGAAGGAGUGGUGGAGCCGACUGAAGUGCGGAUGCCGGCAUGAGUAACGAUAAAAGAAGUGAGAAUCUUCUUCGCCGUAAGGACAAGGGUUCCUGGGGAAGGGUCGUCCGCCCAGGGAAAGUCGGGACCUAAGGUGAGGCCGAACGGCGCAGCCGAUGGACAGCAGGUCAAGAUUCCUGCACCGAUCAUGUGGAGUGAUGGAGGGACGCAUUACGCUAUCCAAUGCCAAGCUAUGGCUAUGCUGGUUGGUACGCUCAAGGGCGAUCGGGUCAGAAAAUCUACCGGUCACAUGCCUCAGACGUAUCGGGAGCUUCCUCGGAAGCGAAGUUGGAAACGCGACGGUGCCAAGAAAAGCUUCUAAACGUUGAAACAUGAUUGCCCGUACCGCAAACCGACACAGGUGUCCGAGUGUCAAUGCACUAAGGCGCGCGAGAGAACCCUCGUUAAGGAACUUUGCAAUCUCACCCCGUAACUUCGGAAGAAGGGGUCCCCACGCUUCGCGUGGGGCGCAGUGAAUAGGCCCAGGCGACUGUUUACCAAAAUCACAGCACUCUGCCAACACGAACAGUGGACGUAUAGGGUGUGACGCCUGCCCGGUGCCGGAAGGUCAAGUGGAGCGGUGCAAGCUGCGAAAUGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAAGGCGUAACGAUCUGGGCGCUGUCUCAACGAGGGACUCGGUGAAAUUGAAUUGGCUGUAAAGAUGCGGCCUACCCGUAGCAGGACGAAAAGACCCCGUGGAGCUUUACUAUAGUCUGGCAUUGGGAUUCGGGUUUCUCUGCGUA... ..GGUGGGAG..AAACUGGCC..GGUCGGUGG..CCACCCUGAGAAACUUGGAUUUCUAACCUGAAAAAUCACUUUCGGGGACCGUGCUUGGCGGGUAGUUUGACUGGGGCGGUCGCCUCCCAAAAUGUAACGGAGGCGCCCAAAGGUCACCUCAAGACGGUUGGAAAUCGUCUGUAGAGCGCAAAGGUAGAAGGUGGCUUGACUGCGAGACUGACACGUCGAGCAGGGAGGAAACUCGGGCUUAGUGAACCGGUGGUACCGUGUGGAAGGGCCAUCGAUCAACGGAUAAAAGUUACCCCGGGGAUAACAGGCUGAUCUCCCCCGAGAGUCCAUAUCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCUACGGGCGCAGGAGAAUUGAGGGGAGUUGCUCCUAGUACGAGAGGACCGGAGUGAACGGACCGCUGGUCUCCCUGCUGUCGUACCAACGGCACAUGCAGGGUAGCUAUGUCCGGAACGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCAGCCCCAAGAUGAGUUCUCCCACUGU... ..UCAGGUAAGACUCCCGGAAGACCACCGGGUUAAGAGGCCAGGCGUGCACGCAUAGCAAUGUGUUCAGCGGACUGGUGCUCAUCAGUCGAGGUCUUGACCA
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151       161       171       181       191       201       211       221       231       241     ... ..292       302       312       322       332       342       352       362         ..387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       817       827       837       847       857       867       877       887  ... ..911       921       931       941       951       961       971       981       991       1001      1011      1021      1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1171      1181      1191      1201      1211      1221      1231      1241      1251      1261      1271      1281      1291      1301      1311      1321      1331      1341      1351      1361      1371      1381      1391      1401      1411      1421      1431      1441      1451      1461      1471      1481      1491      1501      1511      1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621      1631      1641      1651      1661      1671      1681      1691      1701      1711      1721      1731      1741      1751      1761      1771      1781      1791      1801      1811      1821      1831      1841      1851      1861      1871      1881      1891      1901      1911      1921      1931      1941      1951      1961      1971      1981      1991      2001      2011      2021      2031      2041      2051      2061      2071      2081      2091   ... ..2103    ..2117     ..2132     ..2157      2167      2177      2187      2197      2207      2217      2227      2237      2247      2257      2267      2277      2287      2297      2307      2317      2327      2337      2347      2357      2367      2377      2387      2397      2407      2417      2427      2437      2447      2457      2467      2477      2487      2497      2507      2517      2527      2537      2547      2557      2567      2577      2587      2597      2607      2617      2627      2637      2647      2657      2667      2677      2687      2697      2707      2717      2727      2737      2747      2757      2767    ... ..2778      2788      2798      2808      2818      2828      2838      2848      2858      2868      

chain 9 : 5S RIBOSOMAL RRNA
sec str:  ........................................................................................................................
sequence :  ..CCCCCGUGCCCAUAGCACUGUGGAACCACCCCACCCCAUGCCGAACUGGGUCGUGAAACACAGCAGCGCCAAUGAUACUCGGACCGCAGGGUCCCGGAAAAGUCGGUCAGCGCGGGGG
seq num:  ..4         14        24        34        44        54        64        74        84        94        104       114     

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