1ifc: Sequences

PDBeMotif: 1ifc

		Sequences				3D motifs				Ligand environment				Ligand bonds

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Classification:	lipid-binding protein \| release date: Thu, Dec 19, 1991
Title:	refinement of the structure of recombinant rat intestinal fa binding apoprotein at 1.2 angstroms resolution
Authors:	G.SCAPIN, J.C.SACCHETTINI, J.I.GORDON
Method:	X-RAY DIFFRACTION (resolution: 1.19Å)

PDBe Citation

Ligand bond colours:

covalent

ionic

hydrogen

electrostatic

van-der-waals

plane-atom

plane-plane

undefined

- Click here to show 5Å bonds

Chain A sequence:
MAFDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTITQEGNKFTVKESSNFRNIDVVFELGVDFAYSLADGTELT
GTWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKKE

Residue colours: hydrophilic hydrophobic intermediate

Assembly 1

View the assembly/model: (

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chain:

Sequence numbers:

Using:	φ/ψ residues code secondary structures
	coordinates of: Cαs Side-chain

View the fragment:

chain A : INTESTINAL FATTY ACID BINDING PROTEIN member of: CATH:2.40.128.20, GENE3D:G3DSA_2.40.128.20, PANTHER:PTHR11955/PTHR11955_SF65, PFAM:PF00061, PRINTS:FATTYACIDBP, PROSITE PATTERNS:PS00214, SUPERFAMILY:SSF50814, UniProt:P02693
`sec str:`	`..eeeeeeeeeeee.hhhhhhh....hhhhhhhhheeeeeeeee....eeeeee....eeeeee....eeeee....eeeeeeeee....eeeeee.....eeeeeeeee....eeeeee....eeeeeeeee`
`sequence :`	`..AFDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTITQEGNKFTVKESSNFRNIDVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKKE`
`seq num:`	`..1 11 21 31 41 51 61 71 81 91 101 111 121`
`PKC_PHOSPHO_SITE`	`.. \|^ \| \| \| \|\| \| \| \| \| \| \| ^\| \| \| \| \|\| \|\|\| \|\|\| \| \| \| \| \| \| \|`
`CK2_PHOSPHO_SITE`	`.. \| \| \| \| \|\| \| \| \| \| \| \| ^* \| \| \| \|\| \|^\|\| \| \| \| ^** \| \|`
`MYRISTYL`	`.. \| \| \| \| \|\| \| ^*** ^* \| \| \| ^* \| \|^*** \| \| \| \| \| \|`
`FABP`	`.. ****************** \|\| \| \| \| \| \| \| \| \| \| \| \|\|\| \| \| \| \| \| \|`
`asxmotif`	`.. \| \| \| \|***** \| \| \| \| \| \| \| \| \| \|\|\| \| \| \| \| \| \|`
`asxturn`	`.. \| \| \| \| \| \| \| \| \| \| \| \| \| *** \| \| \| \| \| \|`
`betabulgeloop`	`.. \| \| \| \| \| \| \| \| \| \| \| \| ***** \| \| \| \| \| \|`
`betaturn`	`.. \| \| \| \| \| \| \| \| \| \| \| \| **\| \| \| **`
`nest`	`.. * * * \| \| \| \| \| \| * ***`
`niche`	`.. * \| \| **`
`stturn`	`.. ***`

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