triangle PDBeMotif: 1ce9  
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Classification helix capping    | release date: Thu, Mar 18, 1999
Title helix capping in the gcn4 leucine zipper
Authors E.SPEK, H.JI, L.-Y.WANG, M.LU, N.R.KALLENBACH, W.SHU
Method X-RAY DIFFRACTION (resolution: 1.80Å)
PDBe Citation   
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chains A,B,C,D sequence:
MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |       
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER .. |   **********************       
search RasMol script viewer Motif-ligand binding stats  stmotif .. *****                            

chain B : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |   | | 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |   | | 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER .. |   **********************   | | 
search RasMol script viewer Motif-ligand binding stats  nest .. |   |                        *** 
search RasMol script viewer Motif-ligand binding stats  stmotif .. *****                            

chain C : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    ||| ||| 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    ||| ||| 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER ..     **********************|| ||| 
search RasMol script viewer Motif-ligand binding stats  betaturn ..                           |****| 
search RasMol script viewer Motif-ligand binding stats  nest ..                           |  *** 
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..                           ****** 

chain D : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |  |  | 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |  |  | 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER ..     **********************  |  | 
search RasMol script viewer Motif-ligand binding stats  niche ..                             **** 

Assembly 2     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain C : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    ||| ||| 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    ||| ||| 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER ..     **********************|| ||| 
search RasMol script viewer Motif-ligand binding stats  betaturn ..                           |****| 
search RasMol script viewer Motif-ligand binding stats  nest ..                           |  *** 
search RasMol script viewer Motif-ligand binding stats  schellmannloop ..                           ****** 

chain D : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |  |  | 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |  |  | 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER ..     **********************  |  | 
search RasMol script viewer Motif-ligand binding stats  niche ..                             **** 

Assembly 3     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |       
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |       
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER .. |   **********************       
search RasMol script viewer Motif-ligand binding stats  stmotif .. *****                            

chain B : PROTEIN (GCN4-PMSE)
member of: GENE3D:searchG3DSA_1.20.5.1070PANTHER:searchPTHR11462/searchPTHR11462_SF35PFAM:searchPF00170PROSITE PROFILES:searchPS50217, SMART:searchSM00338SUPERFAMILY:searchSSF57959UniProt:searchP03069
sec str:  ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...
sequence :  ..MSVKELEDKVEELLSKNYHLENEVARLKKLVGER
seq num:  ..1         11        21        31  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE .. ^**||                    |   | | 
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE .. ^***|                    |   | | 
search RasMol script viewer Motif-ligand binding stats  LEUCINE_ZIPPER .. |   **********************   | | 
search RasMol script viewer Motif-ligand binding stats  nest .. |   |                        *** 
search RasMol script viewer Motif-ligand binding stats  stmotif .. *****                            

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