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Enzyme   6.3.2.19
Classification sumo conjugating enzyme    | release date: Fri, Jan 23, 1998
Title human ubc9
Authors J.H.NAISMITH, M.GIRAUD
Method X-RAY DIFFRACTION (resolution: 2.80Å)
PDBe Citation   
Ligand bond colours:   *  covalent   *  ionic   *  hydrogen   *  electrostatic   *  van-der-waals   *  plane-atom   *  plane-plane   *  undefined  - Click here to show 5Å bonds
Chain A sequence:
GSMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE
PPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
Residue colours:  hydrophilic   hydrophobic   intermediate 
Assembly 1     View the assembly/model: ( JMolViewer Download PDB file RasMol script viewer AstexViewer™@MSD-EBI )
Motif search   chain:    Sequence numbers: 
   Using:   φ/ψ    residues code    secondary structures   
 coordinates of:  Cαs Side-chain
 
      View the fragment: rasmol script JMol viewer
chain A : UBC9
member of: CATH:search3.10.110.10GENE3D:searchG3DSA_3.10.110.10PANTHER:searchPTHR24067/searchPTHR24067_SF51PFAM:searchPF00179PROSITE PATTERNS:searchPS00183, PROSITE PROFILES:searchPS50127, SMART:searchSM00212SUPERFAMILY:searchSSF54495UniProt:searchP63279
sec str:  .....hhhhhhhhhhhhhhh......eeee...........eeeeeee..........eeeeeee..........eeee.................hhh...........hhhhhhhhhhhhh.........hhhhhhhhh.hhhhhhhhhhhhhh....
sequence :  ..MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS
seq num:  ..1         11        21        31        41        51        61        71        81        91        101       111       121       131       141       151     
search RasMol script viewer Motif-ligand binding stats  CAMP_PHOSPHO_SITE ..  ||  ||  ||   |  | |  |       || | | ||     | **^* ||||                         ||  || ||| | | ||  | ||  || |||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  PKC_PHOSPHO_SITE ..  ||  ||  ||   |  | |  |       || | | ||     | || | ||||                         ||  || ||| | | ||  | ||  |^**||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  CK2_PHOSPHO_SITE ..  ||  ||  ||   |  | |  |       || | | ||     | || ^***||                         ||  || ||| | ^***  | ||  ||  ||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  MYRISTYL ..****  ||  ||   |  | |  |       || | | ||     | || | ||||                         ||  || ||| | | ||  | ||  ||  ||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  AMIDATION ..  |   ||  ||   |  | |  |       || | | ||     ^*** | ||||                         ||  || ||| | | ||  | ||  ||  ||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  UBIQUITIN_CONJUGAT_1 ..  |   ||  ||   |  | |  |       || | | ||       |  | ||||                         ***********^****|  | ||  ||  ||   |  ||   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  alphabetamotif ..  |   |*****   |  | |  |       || | | ||       |  | ||||                          |  || |||   |  |  | ||  |*****   *****   |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  asxturn ..  |   ||  |    |  | |  |       || | ***|       |  | ||||                          |  || |||   |  |  | ||  ||  |    |  |    |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  betabulgeloop ..  |   ||  |    |  | |  |       || | |  |       |  | ||||                          |  |*****   |  |  | ||  ||  |    |  |    |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  betaturn ..  |   |****    |  | |  |       **** |  |       *********                          |  |****|   |  **** |********    ****    |  |                         ****  
search RasMol script viewer Motif-ligand binding stats  gammaturn ..  |   |        |  | |  |        *** |  |       |  | ||||                          |  |  | |   |  |  | ||  |                |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  nest ..  |   |        |  | |  |            |  |       |  | ||||                          |  |  ***   |  |  | ||  |                |  |                         |  |  
search RasMol script viewer Motif-ligand binding stats  niche ..  |   |        **** ****            ****       *********                          ****        ****  *******                ****                         ****  
search RasMol script viewer Motif-ligand binding stats  stmotif ..  |   |                                           *****                                                                                                       
search RasMol script viewer Motif-ligand binding stats  ststaple ..  *****                                           | |                                                                                                         
search RasMol script viewer Motif-ligand binding stats  stturn ..                                                  ***                                                                                                         

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