A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preserved. [ EBI:fc EBI:gr http://www.sequenceontology.org/browser/current_svn/term/SO:ke ]

Synonyms: snpEff:NON_SYNONYMOUS_CODING VAT:nonsynonymous Jannovar:missense_variant missense codon missense VEP:missense_variant Seattleseq:missense VAAST:missense_variant

This is just here as a test because I lose it

Term information

variant annotation term
snpEff:NON_SYNONYMOUS_CODING

variant annotation term
VAAST:non_synonymous_codon

variant annotation term
Seattleseq:missense

variant annotation term
VEP:missense_variant

variant annotation term
VAAST:missense_variant

variant annotation term
Seattleseq:missense-near-splice

variant annotation term
VAT:nonsynonymous

comment

EBI term: Non-synonymous SNPs. SNPs that are located in the coding sequence and result in an amino acid change in the encoded peptide sequence. A change that causes a non_synonymous_codon can be more than 3 bases - for example 4 base substitution.

created by

kareneilbeck

creation date

2010-03-22T02:35:49Z

has alternative id

SO:0001783

SO:0001584

has related synonym

VAAST:non_synonymous_codon

Seattleseq:missense-near-splice

ANNOVAR:nonsynonymous SNV

id

SO:0001583

Term relations

Subclass of: