A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preserved. [ EBI : gr EBI : fc http://www.sequenceontology.org/browser/current_svn/term/SO:ke ]

Synonyms:

snpEff:NON_SYNONYMOUS_CODING

VAT:nonsynonymous

Jannovar:missense_variant

missense

missense codon

VEP:missense_variant

Seattleseq:missense

VAAST:missense_variant

This is just here as a test because I lose it

Term information

variant annotation term
Seattleseq:missense-near-splice
variant annotation term
VAAST:missense_variant
variant annotation term
snpEff:NON_SYNONYMOUS_CODING
variant annotation term
Seattleseq:missense
variant annotation term
VEP:missense_variant
variant annotation term
VAAST:non_synonymous_codon
variant annotation term
VAT:nonsynonymous
comment
  • EBI term: Non-synonymous SNPs. SNPs that are located in the coding sequence and result in an amino acid change in the encoded peptide sequence. A change that causes a non_synonymous_codon can be more than 3 bases - for example 4 base substitution.
created by
  • kareneilbeck
creation date
  • 2010-03-22T02:35:49Z
has alternative id
  • SO:0001783
  • SO:0001584
has related synonym
  • VAAST:non_synonymous_codon
  • Seattleseq:missense-near-splice
  • ANNOVAR:nonsynonymous SNV
id
  • SO:0001583

Term relations

Subclass of: