Search result(s) for Japan

Published data collections

NameDefinition
3DMET 3DMET is a database collecting three-dimensional structures of natural metabolites.
BioProject BioProject provides an organizational framework to access metadata about research projects and the data from the projects that are deposited into different data [...]
BioSample The BioSample Database stores information about biological samples used in molecular experiments, such as sequencing, gene expression or proteomics. It includes [...]
Enzyme Nomenclature The Enzyme Classification contains the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nom [...]
GLIDA GPCR The GPCR-LIgand DAtabase (GLIDA) is a GPCR-related chemical genomic database that is primarily focused on the correlation of information between GPCRs and their [...]
GLIDA Ligand The GPCR-LIgand DAtabase (GLIDA) is a GPCR-related chemical genomic database that is primarily focused on the correlation of information between GPCRs and their [...]
GeneCards The GeneCards human gene database stores gene related transcriptomic, genetic, proteomic, functional and disease information. It uses standard nomenclature and [...]
GlyTouCan GlyTouCan is the single worldwide registry of glycan (carbohydrate sugar chain) data.
GlycoEpitope GlycoEpitope is a database containing useful information about carbohydrate antigens (glyco-epitopes) and the antibodies (polyclonal or monoclonal) that can be [...]
H-InvDb Locus H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. It provides curated annotations of human genes and transcripts inclu [...]
H-InvDb Protein H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. It provides curated annotations of human genes and transcripts inclu [...]
H-InvDb Transcript H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. It provides curated annotations of human genes and transcripts inclu [...]
HUGE The Human Unidentified Gene-Encoded (HUGE) protein database contains results from sequence analysis of human novel large (>4 kb) cDNAs identified in the Kazusa [...]
IDEAL IDEAL provides a collection of knowledge on experimentally verified intrinsically disordered proteins. It contains manual annotations by curators on intrinsical [...]
INSDC CDS The coding sequence or protein identifiers as maintained in INSDC.
JCGGDB JCGGDB (Japan Consortium for Glycobiology and Glycotechnology DataBase) is a database that aims to integrate all glycan-related data held in various repositorie [...]
Japan Chemical Substance Dictionary The Japan Chemical Substance Dictionary is an organic compound dictionary database prepared by the Japan Science and Technology Agency (JST).
Japan Collection of Microorganisms The Japan Collection of Microorganisms (JCM) collects, catalogues, and distributes cultured microbial strains, restricted to those classified in Risk Group 1 or [...]
KEGG Compound KEGG compound contains our knowledge on the universe of chemical substances that are relevant to life.
KEGG Disease The KEGG DISEASE database is a collection of disease entries capturing knowledge on genetic and environmental perturbations. Each disease entry contains a list [...]
KEGG Drug KEGG DRUG contains chemical structures of drugs and additional information such as therapeutic categories and target molecules.
KEGG Environ KEGG ENVIRON (renamed from EDRUG) is a collection of crude drugs, essential oils, and other health-promoting substances, which are mostly natural products of pl [...]
KEGG Genes KEGG GENES is a collection of gene catalogs for all complete genomes and some partial genomes, generated from publicly available resources.
KEGG Genome KEGG Genome is a collection of organisms whose genomes have been completely sequenced.
KEGG Glycan KEGG GLYCAN, a part of the KEGG LIGAND database, is a collection of experimentally determined glycan structures. It contains all unique structures taken from Ca [...]
KEGG Metagenome The KEGG Metagenome Database collection information on environmental samples (ecosystems) of genome sequences for multiple species.
KEGG Module KEGG Modules are manually defined functional units used in the annotation and biological interpretation of sequenced genomes. Each module corresponds to a set o [...]
KEGG Orthology KEGG Orthology (KO) consists of manually defined, generalised ortholog groups that correspond to KEGG pathway nodes and BRITE hierarchy nodes in all organisms.
KEGG Pathway KEGG PATHWAY is a collection of manually drawn pathway maps representing our knowledge on the molecular interaction and reaction networks.
KEGG Reaction KEGG reaction contains our knowledge on the universe of reactions that are relevant to life.
KnapSack Knapsack provides information on metabolites and the taxonomic class with which they are associated.
Kyoto Encyclopedia of Genes and Genomes Kyoto Encyclopedia of Genes and Genomes (KEGG) is a database resource for understanding high-level functions and utilities of the biological system, such as the [...]
LigandBox LigandBox is a database of 3D compound structures. Compound information is collected from the catalogues of various commercial suppliers, with approved drugs a [...]
LipidBank LipidBank is an open, publicly free database of natural lipids including fatty acids, glycerolipids, sphingolipids, steroids, and various vitamins.
MassBank MassBank is a federated database of reference spectra from different instruments, including high-resolution mass spectra of small metabolites (<3000 Da).
NEXTDB NextDb is a database that provides information on the expression pattern map of the 100Mb genome of the nematode Caenorhabditis elegans. This was done through E [...]
NITE Biological Research Center Catalogue NITE Biological Research Center (NBRC) provides a collection of microbial resources, performing taxonomic characterization of individual microorganisms such as [...]
Nucleotide Sequence Database The International Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequ [...]
Oryzabase Gene Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains informa [...]
Oryzabase Mutant Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains informa [...]
Oryzabase Stage Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains informa [...]
Oryzabase Strain Oryzabase provides a view of rice (Oryza sativa) as a model monocot plant by integrating biological data with molecular genomic information. It contains informa [...]
PSCDB The PSCDB (Protein Structural Change DataBase) collects information on the relationship between protein structural change upon ligand binding. Each entry page p [...]
Protein Data Bank The Protein Data Bank is the single worldwide archive of structural data of biological macromolecules.
Rouge The Rouge protein database contains results from sequence analysis of novel large (>4 kb) cDNAs identified in the Kazusa cDNA sequencing project.
Sequence Read Archive The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms Data submitted to SRA. It is organized using a metad [...]
Spectral Database for Organic Compounds The Spectral Database for Organic Compounds (SDBS) is an integrated spectral database system for organic compounds. It provides access to 6 different types of s [...]
dbEST The dbEST contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms.

48 published data collections returned.