Data collection: APID Interactomes

protein interaction

General information

Recommended name APID Interactomes
Alternative name(s)
  • Agile Protein Interactomes DataServer
Description APID (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). Interactome data includes a report on quality levels and coverage over the proteomes for each organism included. APID integrates PPIs from primary databases of molecular interactions (BIND, BioGRID, DIP, HPRD, IntAct, MINT) and also from experimentally resolved 3D structures (PDB) where more than two distinct proteins have been identified. This collection references protein interactors, through a UniProt identifier.
Identifier pattern^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$
Registry identifierMIR:00000576

Identification schemes

Namespace apid.interactions
URI https://identifiers.org/apid.interactions
Compact Identifier apid.interactions:{accession number}
Alternative URI schemes  

Physical locations (resources)

Resource
MIR:00100769
Description APID at Salamanca
Access URLs HTML   (using the example identifier: P01116)
Institution Cancer Research Center (CiC-IBMCC), Consejo Superior de Investigaciones Científicas (CSIC) and Universidad de Salamanca (USAL), Salamanca, Spain
Website http://cicblade.dep.usal.es:8080/APID/

References