Data collection: EPD

expression eukaryotic sequence DNA

General information

Recommended name EPD
Alternative name(s)
  • Eukaryotic Promoter Database
Description The Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters, for which the transcription start site has been determined experimentally. Access to promoter sequences is provided by pointers to positions in nucleotide sequence entries. The annotation part of an entry includes description of the initiation site mapping data, cross-references to other databases, and bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis.
Identifier pattern^[A-Z-_0-9]+$
Registry identifierMIR:00000408

Identification schemes

Namespace epd
Compact Identifier epd:{accession number}
Alternative URI schemes  

Physical locations (resources)

Description EPD at Swiss Institute of Bioinformatics
Access URLs HTML   (using the example identifier: TA_H3)
Institution Swiss Institute of Bioinformatics (SIB), Geneva, Switzerland
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