Data collection: DASHR

nucleotide sequence human

General information

Recommended name DASHR
Alternative name(s)
  • Database of small human noncoding RNAs
Description DASHR reports the annotation, expression and evidence for specific RNA processing (cleavage specificity scores/entropy) of human sncRNA genes, precursor and mature sncRNA products across different human tissues and cell types. DASHR integrates information from multiple existing annotation resources for small non-coding RNAs, including microRNAs (miRNAs), Piwi-interacting (piRNAs), small nuclear (snRNAs), nucleolar (snoRNAs), cytoplasmic (scRNAs), transfer (tRNAs), tRNA fragments (tRFs), and ribosomal RNAs (rRNAs). These datasets were obtained from non-diseased human tissues and cell types and were generated for studying or profiling small non-coding RNAs. This collection references RNA records.
Identifier pattern^(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$
Registry identifierMIR:00000564

Identification schemes

Namespace dashr
URI http://identifiers.org/dashr/
Alternative URI schemes  

Physical locations (resources)

Resource
MIR:00100741
Description DASHR at University of Pennsylvania
Access URLs HTML   (using the example identifier: hsa-mir-200a)
Institution Department of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, USA
Website http://lisanwanglab.org/DASHR/

References